Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1039716044-03834-940 Query= (511 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,247,039 sequences; 397,579,747 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
RID: 1039716044-03834-940
Query= (511 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,247,039 sequences; 397,579,747 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Related Structures Score E Sequences producing significant alignments: (bits) Value gi|18146960|dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis... 182 1e-45 gi|18395411|ref|NP_565288.1| putative receptor-like protein... 177 4e-44 gi|7487253|pir||T00857 probable receptor-like protein kinas... 121 5e-27 gi|15231245|ref|NP_190164.1| nonphototropic hypocotyl 1; pr... 120 1e-26 gi|7804485|dbj|BAA95669.1| phototropin [Adiantum capillus-v... 119 2e-26 gi|12040650|gb|AAB41023.2| phototropin-like protein PsPK4 [... 119 2e-26 gi|20338415|gb|AAM15725.1| phototropin 1 [Pisum sativum] 119 2e-26 gi|24899168|dbj|BAC23098.1| phototropin [Vicia faba] 117 5e-26 gi|20260484|gb|AAM13140.1| unknown protein [Arabidopsis tha... 117 9e-26 gi|18424070|ref|NP_568874.1| non phototropic hypocotyl 1-li... 117 9e-26 gi|7489361|pir||T08033 serine/threonine protein kinase (EC ... 117 9e-26 gi|6688928|emb|CAB65325.1| non-phototropic hypocotyl NPH1 [... 117 9e-26 gi|7489362|pir||T08034 serine/threonine protein kinase (EC ... 117 9e-26 gi|6006310|dbj|BAA84779.1| nonphototrophic hypocotyl 1b [Or... 117 9e-26 gi|6006312|dbj|BAA84780.1| nonphototrophic hypocotyl 1a [Or... 115 2e-25 gi|24899170|dbj|BAC23099.1| phototropin [Vicia faba] 115 2e-25 gi|541825|pir||S42868 serine/threonine protein kinase (EC 2... 115 3e-25 gi|7489818|pir||T01353 serine/threonine protein kinase (EC ... 114 4e-25 gi|20797097|emb|CAC94941.1| putative blue light receptor [C... 114 7e-25 gi|20797092|emb|CAC94940.1| putative blue light receptor [C... 114 7e-25 gi|19570333|dbj|BAA36192.2| PHY3 [Adiantum capillus-veneris] 109 2e-23 gi|7522091|pir||T30891 PHY3 protein - maidenhair fern 109 2e-23 gi|541818|pir||S42866 serine/threonine protein kinase (EC 2... 106 2e-22 gi|21730387|pdb|1JNU|A Chain A, Photoexcited Structure Of T... 105 3e-22 gi|23012145|gb|ZP_00052303.1| hypothetical protein [Magneto... 102 2e-21 gi|17989024|ref|NP_541657.1| SENSORY TRANSDUCTION HISTIDINE... 100 1e-20 gi|23500332|ref|NP_699772.1| sensory box protein [Brucella ... 100 1e-20 gi|16124540|ref|NP_419104.1| sensory box histidine kinase [... 99 2e-20 gi|23468757|gb|ZP_00124092.1| hypothetical protein [Pseudom... 99 2e-20 gi|21243288|ref|NP_642870.1| sensor histidine kinase [Xanth... 99 3e-20 gi|21231858|ref|NP_637775.1| sensor histidine kinase [Xanth... 96 3e-19 gi|23010750|gb|ZP_00051334.1| hypothetical protein [Magneto... 94 1e-18 gi|23109511|gb|ZP_00095689.1| hypothetical protein [Novosph... 93 2e-18 gi|23106787|gb|ZP_00093141.1| hypothetical protein [Novosph... 92 2e-18 gi|16080086|ref|NP_390912.1| similar to protein kinase [Bac... 85 5e-16 gi|17230367|ref|NP_486915.1| two-component hybrid sensor an... 84 8e-16 gi|14917059|sp|Q01371|WC1_NEUCR White collar 1 protein (WC1... 80 9e-15 gi|7493974|pir||S69206 regulator protein white collar 1 - N... 80 9e-15 gi|22298825|ref|NP_682072.1| two-component hybrid sensor an... 79 2e-14 gi|6754424|ref|NP_034731.1| potassium voltage-gated channel... 78 6e-14 gi|8659557|ref|NP_058804.1| potassium voltage-gated channel... 78 6e-14 gi|23129382|gb|ZP_00111211.1| hypothetical protein [Nostoc ... 78 6e-14 gi|6331348|dbj|BAA86596.1| KIAA1282 protein [Homo sapiens] 78 6e-14 gi|14757072|ref|XP_035483.1| similar to BEC1 [Homo sapiens]... 78 6e-14 gi|16802841|ref|NP_464326.1| lmo0799 [Listeria monocytogene... 77 8e-14 gi|17230662|ref|NP_487210.1| hypothetical protein [Nostoc s... 77 1e-13 gi|9558434|dbj|BAB03370.1| unnamed protein product [Oryza s... 76 2e-13 gi|16799866|ref|NP_470134.1| lin0792 [Listeria innocua] >gi... 75 3e-13 gi|23098043|ref|NP_691509.1| protein kinase [Oceanobacillus... 75 3e-13 gi|22974082|gb|ZP_00020459.1| hypothetical protein [Chlorof... 75 3e-13 gi|7512004|pir||T13168 probable potassium channel elk chain... 75 5e-13 gi|17136946|ref|NP_477009.1| CG5076-PA [Drosophila melanoga... 75 5e-13 gi|13623463|gb|AAH06334.1|AAH06334 Similar to Eag-related g... 74 9e-13 gi|13540549|ref|NP_110406.1| Eag-related gene member 2 [Hom... 74 9e-13 gi|21750348|dbj|BAC03764.1| unnamed protein product [Homo s... 74 9e-13 gi|16758818|ref|NP_446389.1| Eag-related gene member 2 [Rat... 74 9e-13 gi|25056082|ref|XP_204529.1| similar to potassium voltage-g... 74 9e-13 gi|16758436|ref|NP_446082.1| potassium voltage-gated channe... 74 1e-12 gi|7514051|pir||T31354 probable potassium channel elk chain... 74 1e-12 gi|6912446|ref|NP_036417.1| potassium voltage-gated channel... 74 1e-12 gi|15790465|ref|NP_280289.1| bacterio-opsin activator; Bat ... 73 2e-12 gi|16331282|ref|NP_442010.1| hypothetical protein [Synechoc... 72 4e-12 gi|114838|sp|P13260|BAT_HALHA Putative bacterio-opsin activ... 71 6e-12 gi|17548475|ref|NP_521815.1| PROBABLE TRANSMEMBRANE PROTEIN... 70 9e-12 gi|23123956|gb|ZP_00105980.1| hypothetical protein [Nostoc ... 70 9e-12 gi|17228724|ref|NP_485272.1| two-component sensor histidine... 70 1e-11 gi|12831203|gb|AAK08514.1|AF338412_1 vivid PAS protein VVD ... 68 5e-11 gi|23054660|gb|ZP_00080807.1| hypothetical protein [Geobact... 67 1e-10 gi|26006798|sp|O35219|KCH2_MOUSE Potassium voltage-gated ch... 67 1e-10 gi|7305203|ref|NP_038597.1| voltage-gated potassium channel... 67 1e-10 gi|26051271|ref|NP_742053.1| voltage-gated potassium channe... 67 1e-10 gi|11933152|dbj|BAB19682.1| HERG-USO [Homo sapiens] 67 1e-10 gi|16758828|ref|NP_446401.1| voltage-gated potassium channe... 67 1e-10 gi|26006805|sp|Q8WNY2|KCH2_RABIT Potassium voltage-gated ch... 67 1e-10 gi|22959383|gb|ZP_00007036.1| hypothetical protein [Rhodoba... 67 1e-10 gi|4557729|ref|NP_000229.1| voltage-gated potassium channel... 67 1e-10 gi|21717341|gb|AAL35327.2|AF439342_1 ERG potassium channel ... 67 1e-10 gi|22795050|gb|AAN05415.1| ether-a-go-go related potassium ... 67 1e-10 gi|26006813|sp|Q9TSZ3|KCH2_CANFA Potassium voltage-gated ch... 67 1e-10 gi|3452413|emb|CAA09232.1| ether-a-go-go-related protein [H... 67 1e-10 gi|4092501|gb|AAC99425.1| potassium channel protein ERG lon... 66 2e-10 gi|6729769|pdb|1BYW|A Chain A, Structure Of The N-Terminal ... 66 2e-10 gi|23012316|gb|ZP_00052432.1| hypothetical protein [Magneto... 65 3e-10 gi|6729194|dbj|BAA89701.1| 145..153:the transposed position... 65 4e-10 gi|23597578|ref|XP_130310.2| potassium channel protein erg3... 64 7e-10 gi|18777774|ref|NP_571987.1| potassium channel erg3 [Rattus... 64 9e-10 gi|15150797|ref|NP_150375.1| potassium voltage-gated channe... 64 9e-10 gi|23274196|gb|AAH35815.1| Similar to potassium voltage-gat... 64 9e-10 gi|21389455|ref|NP_653234.1| potassium voltage-gated channe... 63 2e-09 gi|20909852|ref|XP_138175.1| similar to eag K+ channel, iso... 63 2e-09 gi|22347787|gb|AAM95975.1| erg K+ channel [Danio rerio] 62 3e-09 gi|26006809|sp|Q9ER47|KCH7_MOUSE Potassium voltage-gated ch... 62 3e-09 gi|18146958|dbj|BAB83169.1| LOV kelch protein 2 [Arabidopsi... 62 3e-09 gi|7485778|pir||T01619 hypothetical protein At2g18910 [impo... 62 3e-09 gi|24215121|ref|NP_712602.1| two-component hybrid sensor an... 61 6e-09 gi|18423971|ref|NP_568855.1| F-box protein ZTL/LKP1/ADO1, A... 61 6e-09 gi|14532556|gb|AAK64006.1| AT5g57360/MSF19_2 [Arabidopsis t... 61 6e-09 gi|3702618|emb|CAA07591.1| ELK channel 3 [Rattus norvegicus] 61 6e-09 gi|21489989|ref|NP_659563.1| ether-a-go-go-like potassium c... 61 6e-09 gi|23124651|gb|ZP_00106627.1| hypothetical protein [Nostoc ... 61 8e-09 Alignments
Related Structures Score E Sequences producing significant alignments: (bits) Value gi|18146960|dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis... 182 1e-45 gi|18395411|ref|NP_565288.1| putative receptor-like protein... 177 4e-44 gi|7487253|pir||T00857 probable receptor-like protein kinas... 121 5e-27 gi|15231245|ref|NP_190164.1| nonphototropic hypocotyl 1; pr... 120 1e-26 gi|7804485|dbj|BAA95669.1| phototropin [Adiantum capillus-v... 119 2e-26 gi|12040650|gb|AAB41023.2| phototropin-like protein PsPK4 [... 119 2e-26 gi|20338415|gb|AAM15725.1| phototropin 1 [Pisum sativum] 119 2e-26 gi|24899168|dbj|BAC23098.1| phototropin [Vicia faba] 117 5e-26 gi|20260484|gb|AAM13140.1| unknown protein [Arabidopsis tha... 117 9e-26 gi|18424070|ref|NP_568874.1| non phototropic hypocotyl 1-li... 117 9e-26 gi|7489361|pir||T08033 serine/threonine protein kinase (EC ... 117 9e-26 gi|6688928|emb|CAB65325.1| non-phototropic hypocotyl NPH1 [... 117 9e-26 gi|7489362|pir||T08034 serine/threonine protein kinase (EC ... 117 9e-26 gi|6006310|dbj|BAA84779.1| nonphototrophic hypocotyl 1b [Or... 117 9e-26 gi|6006312|dbj|BAA84780.1| nonphototrophic hypocotyl 1a [Or... 115 2e-25 gi|24899170|dbj|BAC23099.1| phototropin [Vicia faba] 115 2e-25 gi|541825|pir||S42868 serine/threonine protein kinase (EC 2... 115 3e-25 gi|7489818|pir||T01353 serine/threonine protein kinase (EC ... 114 4e-25 gi|20797097|emb|CAC94941.1| putative blue light receptor [C... 114 7e-25 gi|20797092|emb|CAC94940.1| putative blue light receptor [C... 114 7e-25 gi|19570333|dbj|BAA36192.2| PHY3 [Adiantum capillus-veneris] 109 2e-23 gi|7522091|pir||T30891 PHY3 protein - maidenhair fern 109 2e-23 gi|541818|pir||S42866 serine/threonine protein kinase (EC 2... 106 2e-22 gi|21730387|pdb|1JNU|A Chain A, Photoexcited Structure Of T... 105 3e-22 gi|23012145|gb|ZP_00052303.1| hypothetical protein [Magneto... 102 2e-21 gi|17989024|ref|NP_541657.1| SENSORY TRANSDUCTION HISTIDINE... 100 1e-20 gi|23500332|ref|NP_699772.1| sensory box protein [Brucella ... 100 1e-20 gi|16124540|ref|NP_419104.1| sensory box histidine kinase [... 99 2e-20 gi|23468757|gb|ZP_00124092.1| hypothetical protein [Pseudom... 99 2e-20 gi|21243288|ref|NP_642870.1| sensor histidine kinase [Xanth... 99 3e-20 gi|21231858|ref|NP_637775.1| sensor histidine kinase [Xanth... 96 3e-19 gi|23010750|gb|ZP_00051334.1| hypothetical protein [Magneto... 94 1e-18 gi|23109511|gb|ZP_00095689.1| hypothetical protein [Novosph... 93 2e-18 gi|23106787|gb|ZP_00093141.1| hypothetical protein [Novosph... 92 2e-18 gi|16080086|ref|NP_390912.1| similar to protein kinase [Bac... 85 5e-16 gi|17230367|ref|NP_486915.1| two-component hybrid sensor an... 84 8e-16 gi|14917059|sp|Q01371|WC1_NEUCR White collar 1 protein (WC1... 80 9e-15 gi|7493974|pir||S69206 regulator protein white collar 1 - N... 80 9e-15 gi|22298825|ref|NP_682072.1| two-component hybrid sensor an... 79 2e-14 gi|6754424|ref|NP_034731.1| potassium voltage-gated channel... 78 6e-14 gi|8659557|ref|NP_058804.1| potassium voltage-gated channel... 78 6e-14 gi|23129382|gb|ZP_00111211.1| hypothetical protein [Nostoc ... 78 6e-14 gi|6331348|dbj|BAA86596.1| KIAA1282 protein [Homo sapiens] 78 6e-14 gi|14757072|ref|XP_035483.1| similar to BEC1 [Homo sapiens]... 78 6e-14 gi|16802841|ref|NP_464326.1| lmo0799 [Listeria monocytogene... 77 8e-14 gi|17230662|ref|NP_487210.1| hypothetical protein [Nostoc s... 77 1e-13 gi|9558434|dbj|BAB03370.1| unnamed protein product [Oryza s... 76 2e-13 gi|16799866|ref|NP_470134.1| lin0792 [Listeria innocua] >gi... 75 3e-13 gi|23098043|ref|NP_691509.1| protein kinase [Oceanobacillus... 75 3e-13 gi|22974082|gb|ZP_00020459.1| hypothetical protein [Chlorof... 75 3e-13 gi|7512004|pir||T13168 probable potassium channel elk chain... 75 5e-13 gi|17136946|ref|NP_477009.1| CG5076-PA [Drosophila melanoga... 75 5e-13 gi|13623463|gb|AAH06334.1|AAH06334 Similar to Eag-related g... 74 9e-13 gi|13540549|ref|NP_110406.1| Eag-related gene member 2 [Hom... 74 9e-13 gi|21750348|dbj|BAC03764.1| unnamed protein product [Homo s... 74 9e-13 gi|16758818|ref|NP_446389.1| Eag-related gene member 2 [Rat... 74 9e-13 gi|25056082|ref|XP_204529.1| similar to potassium voltage-g... 74 9e-13 gi|16758436|ref|NP_446082.1| potassium voltage-gated channe... 74 1e-12 gi|7514051|pir||T31354 probable potassium channel elk chain... 74 1e-12 gi|6912446|ref|NP_036417.1| potassium voltage-gated channel... 74 1e-12 gi|15790465|ref|NP_280289.1| bacterio-opsin activator; Bat ... 73 2e-12 gi|16331282|ref|NP_442010.1| hypothetical protein [Synechoc... 72 4e-12 gi|114838|sp|P13260|BAT_HALHA Putative bacterio-opsin activ... 71 6e-12 gi|17548475|ref|NP_521815.1| PROBABLE TRANSMEMBRANE PROTEIN... 70 9e-12 gi|23123956|gb|ZP_00105980.1| hypothetical protein [Nostoc ... 70 9e-12 gi|17228724|ref|NP_485272.1| two-component sensor histidine... 70 1e-11 gi|12831203|gb|AAK08514.1|AF338412_1 vivid PAS protein VVD ... 68 5e-11 gi|23054660|gb|ZP_00080807.1| hypothetical protein [Geobact... 67 1e-10 gi|26006798|sp|O35219|KCH2_MOUSE Potassium voltage-gated ch... 67 1e-10 gi|7305203|ref|NP_038597.1| voltage-gated potassium channel... 67 1e-10 gi|26051271|ref|NP_742053.1| voltage-gated potassium channe... 67 1e-10 gi|11933152|dbj|BAB19682.1| HERG-USO [Homo sapiens] 67 1e-10 gi|16758828|ref|NP_446401.1| voltage-gated potassium channe... 67 1e-10 gi|26006805|sp|Q8WNY2|KCH2_RABIT Potassium voltage-gated ch... 67 1e-10 gi|22959383|gb|ZP_00007036.1| hypothetical protein [Rhodoba... 67 1e-10 gi|4557729|ref|NP_000229.1| voltage-gated potassium channel... 67 1e-10 gi|21717341|gb|AAL35327.2|AF439342_1 ERG potassium channel ... 67 1e-10 gi|22795050|gb|AAN05415.1| ether-a-go-go related potassium ... 67 1e-10 gi|26006813|sp|Q9TSZ3|KCH2_CANFA Potassium voltage-gated ch... 67 1e-10 gi|3452413|emb|CAA09232.1| ether-a-go-go-related protein [H... 67 1e-10 gi|4092501|gb|AAC99425.1| potassium channel protein ERG lon... 66 2e-10 gi|6729769|pdb|1BYW|A Chain A, Structure Of The N-Terminal ... 66 2e-10 gi|23012316|gb|ZP_00052432.1| hypothetical protein [Magneto... 65 3e-10 gi|6729194|dbj|BAA89701.1| 145..153:the transposed position... 65 4e-10 gi|23597578|ref|XP_130310.2| potassium channel protein erg3... 64 7e-10 gi|18777774|ref|NP_571987.1| potassium channel erg3 [Rattus... 64 9e-10 gi|15150797|ref|NP_150375.1| potassium voltage-gated channe... 64 9e-10 gi|23274196|gb|AAH35815.1| Similar to potassium voltage-gat... 64 9e-10 gi|21389455|ref|NP_653234.1| potassium voltage-gated channe... 63 2e-09 gi|20909852|ref|XP_138175.1| similar to eag K+ channel, iso... 63 2e-09 gi|22347787|gb|AAM95975.1| erg K+ channel [Danio rerio] 62 3e-09 gi|26006809|sp|Q9ER47|KCH7_MOUSE Potassium voltage-gated ch... 62 3e-09 gi|18146958|dbj|BAB83169.1| LOV kelch protein 2 [Arabidopsi... 62 3e-09 gi|7485778|pir||T01619 hypothetical protein At2g18910 [impo... 62 3e-09 gi|24215121|ref|NP_712602.1| two-component hybrid sensor an... 61 6e-09 gi|18423971|ref|NP_568855.1| F-box protein ZTL/LKP1/ADO1, A... 61 6e-09 gi|14532556|gb|AAK64006.1| AT5g57360/MSF19_2 [Arabidopsis t... 61 6e-09 gi|3702618|emb|CAA07591.1| ELK channel 3 [Rattus norvegicus] 61 6e-09 gi|21489989|ref|NP_659563.1| ether-a-go-go-like potassium c... 61 6e-09 gi|23124651|gb|ZP_00106627.1| hypothetical protein [Nostoc ... 61 8e-09
>gi|18146960|dbj|BAB83170.1| twin LOV protein 1 [Arabidopsis thaliana] Length = 397 Score = 182 bits (463), Expect = 1e-45 Identities = 97/169 (57%), Positives = 122/169 (72%), Gaps = 1/169 (0%) Frame = +1 Query: 7 NSISSALNRYSKLTGLVVCGKRCDSVGIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIY 186 N++ S L YS+L+G +VCGKR G+ LSSSL +SLGRIKQSFVLT+P LPDMPIIY Sbjct: 216 NNVLSILVHYSELSGRLVCGKRYCLRGVDCLSSSLVISLGRIKQSFVLTNPCLPDMPIIY 275 Query: 187 ASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHICSEQACTVHLLNYRKGGSS 366 ASDAFL+LTGY R+E+LG NCRFL+G T VL ++ + I Q+CTV +LNYRK SS Sbjct: 276 ASDAFLTLTGYKRQEVLGQNCRFLSGVDTDSSVLYEMKECILKGQSCTVQILNYRKDKSS 335 Query: 367 FRDLLHISPIRNASGEVAFHVWVHLDEGAK-YDFNGLTPEVWQLGAVGA 510 F +LLHISP+RNASG+ A+ V V ++ + + L PE QL VGA Sbjct: 336 FWNLLHISPVRNASGKTAYFVGVQVEASCRNTEIKELRPETRQLSVVGA 384
Score = 81.3 bits (199), Expect = 5e-15 Identities = 39/93 (41%), Positives = 58/93 (62%) Frame = +1 Query: 118 SLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQI 297 +L + +F +TDP + PI++AS FL +TGYSREE++G N + GP T+ + +I Sbjct: 31 ALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKVFQGPKTNRRSIMEI 90 Query: 298 NQHICSEQACTVHLLNYRKGGSSFRDLLHISPI 396 + I E++ V LLNYRK GS F L H+ P+ Sbjct: 91 REAIREERSVQVSLLNYRKSGSPFWMLFHMCPV 123
>gi|18395411|ref|NP_565288.1| putative receptor-like protein kinase; protein id: At2g02710.1, supported by cDNA: gi_15010681, supported by cDNA: gi_16323301 [Arabidopsis thaliana] gi|15010682|gb|AAK74000.1| At2g02710/T20F6.15 [Arabidopsis thaliana] gi|16323302|gb|AAL15406.1| At2g02710/T20F6.15 [Arabidopsis thaliana] gi|20196957|gb|AAC05351.2| putative receptor-like protein kinase [Arabidopsis thaliana] Length = 399 Score = 177 bits (450), Expect = 4e-44 Identities = 97/171 (56%), Positives = 122/171 (71%), Gaps = 3/171 (1%) Frame = +1 Query: 7 NSISSALNRYSKLTGLVVCGKRCDSVGIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIY 186 N++ S L YS+L+G +VCGKR G+ LSSSL +SLGRIKQSFVLT+P LPDMPIIY Sbjct: 216 NNVLSILVHYSELSGRLVCGKRYCLRGVDCLSSSLVISLGRIKQSFVLTNPCLPDMPIIY 275 Query: 187 ASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHICSEQACTVHLLNY--RKGG 360 ASDAFL+LTGY R+E+LG NCRFL+G T VL ++ + I Q+CTV +LNY RK Sbjct: 276 ASDAFLTLTGYKRQEVLGQNCRFLSGVDTDSSVLYEMKECILKGQSCTVQILNYSNRKDK 335 Query: 361 SSFRDLLHISPIRNASGEVAFHVWVHLDEGAK-YDFNGLTPEVWQLGAVGA 510 SSF +LLHISP+RNASG+ A+ V V ++ + + L PE QL VGA Sbjct: 336 SSFWNLLHISPVRNASGKTAYFVGVQVEASCRNTEIKELRPETRQLSVVGA 386
>gi|7487253|pir||T00857 probable receptor-like protein kinase [imported] - Arabidopsis thaliana Length = 429 Score = 121 bits (303), Expect = 5e-27 Identities = 62/94 (65%), Positives = 74/94 (78%) Frame = +1 Query: 7 NSISSALNRYSKLTGLVVCGKRCDSVGIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIY 186 N++ S L YS+L+G +VCGKR G+ LSSSL +SLGRIKQSFVLT+P LPDMPIIY Sbjct: 216 NNVLSILVHYSELSGRLVCGKRYCLRGVDCLSSSLVISLGRIKQSFVLTNPCLPDMPIIY 275 Query: 187 ASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 ASDAFL+LTGY R+E+LG NCRFL+G T VL Sbjct: 276 ASDAFLTLTGYKRQEVLGQNCRFLSGVDTDSSVL 309
>gi|15231245|ref|NP_190164.1| nonphototropic hypocotyl 1; protein id: At3g45780.1, supported by cDNA: gi_13430611, supported by cDNA: gi_14532875, supported by cDNA: gi_2832240 [Arabidopsis thaliana] gi|25090817|sp|O48963|NPH1_ARATH Nonphototropic hypocotyl protein 1 (Phototropin) gi|11358584|pir||T47518 serine/threonine protein kinase (EC 2.7.1.-), nonphototropic hypocotyl protein 1 - Arabidopsis thaliana gi|2832241|gb|AAC01753.1| nonphototropic hypocotyl 1 [Arabidopsis thaliana] gi|7019644|emb|CAB75791.1| nonphototropic hypocotyl 1 [Arabidopsis thaliana] gi|13430612|gb|AAK25928.1|AF360218_1 putative nonphototropic hypocotyl 1 protein [Arabidopsis thaliana] gi|14532876|gb|AAK64120.1| putative nonphototropic hypocotyl 1 protein [Arabidopsis thaliana] Length = 996 Score = 120 bits (300), Expect = 1e-26 Identities = 59/117 (50%), Positives = 82/117 (70%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT YSREEILG NCRFL GP T + + Sbjct: 466 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDLTTV 525 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKY 459 ++I I ++ TV L+NY K G F ++ H+ P+R+ GEV + + V LD G+K+ Sbjct: 526 KKIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQLD-GSKH 581
Score = 101 bits (252), Expect = 4e-21 Identities = 52/129 (40%), Positives = 82/129 (63%), Gaps = 5/129 (3%) Frame = +1 Query: 85 GIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNG 264 GIP +S L +L +Q+FV++D PD PI+YAS F ++TGY+ +E++G NCRFL G Sbjct: 180 GIPRVSEDLKDALSTFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVVGRNCRFLQG 239 Query: 265 PGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 GT + L +I + + + +LNY+K G+SF +LL I+PI++ SG+V + + ++ Sbjct: 240 SGTDADELAKIRETLAAGNNYCGRILNYKKDGTSFWNLLTIAPIKDESGKVLKFIGMQVE 299 Query: 445 -----EGAK 456 EGAK Sbjct: 300 VSKHTEGAK 308
>gi|7804485|dbj|BAA95669.1| phototropin [Adiantum capillus-veneris] Length = 1092 Score = 119 bits (298), Expect = 2e-26 Identities = 62/117 (52%), Positives = 81/117 (69%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD FL LT YSREEILG NCRFL GP T+ E + Sbjct: 558 LATTLERIEKNFVITDPRLPDNPIIFASDNFLELTEYSREEILGRNCRFLQGPDTNRETV 617 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKY 459 + I I +E+ TV LLNY K G +F +L H+ P+R+ GE+ + V LD G +Y Sbjct: 618 KLIRDAIDNEKEVTVQLLNYTKTGRTFWNLFHLQPMRDHKGELQYFTGVQLD-GTEY 673
Score = 95.1 bits (235), Expect = 4e-19 Identities = 47/119 (39%), Positives = 73/119 (61%) Frame = +1 Query: 88 IPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGP 267 IP +S + +L +Q+FV+ D PD+PI+YAS F +TGY+ E++G NCRFL G Sbjct: 263 IPRVSKDVLQALEGFQQTFVIADGTKPDLPIMYASAGFFKMTGYTSSEVIGRNCRFLQGK 322 Query: 268 GTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 T E +++I + I LLNY+K GS+F +LL ISPI++ G V ++ + ++ Sbjct: 323 ETDPEEIDRIRECISKGSGYCGRLLNYKKDGSAFWNLLTISPIKDVDGSVLKYIGMQVE 381
>gi|12040650|gb|AAB41023.2| phototropin-like protein PsPK4 [Pisum sativum] Length = 976 Score = 119 bits (297), Expect = 2e-26 Identities = 58/112 (51%), Positives = 77/112 (68%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT YSREEILG NCRFL GP T + Sbjct: 439 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQGPETDPATV 498 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 +I + I ++ TV L+NY K G F +L H+ P+R+ GEV + + V LD Sbjct: 499 RKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQLD 550
Score = 92.0 bits (227), Expect = 3e-18 Identities = 46/114 (40%), Positives = 70/114 (61%) Frame = +1 Query: 76 DSVGIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRF 255 D G P +S L +L +Q+FV++D PD PI+YAS F +TGY+ +E++G NCRF Sbjct: 145 DPRGFPRVSEDLKDALSAFQQTFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRF 204 Query: 256 LNGPGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEV 417 L G T + + +I + + ++ LLNY+K G+ F +LL ISPI++ G V Sbjct: 205 LQGADTDPDDVARIREALEGGKSFCGRLLNYKKDGTPFWNLLTISPIKDDDGNV 258
>gi|20338415|gb|AAM15725.1| phototropin 1 [Pisum sativum] Length = 976 Score = 119 bits (297), Expect = 2e-26 Identities = 58/112 (51%), Positives = 77/112 (68%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT YSREEILG NCRFL GP T + Sbjct: 439 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQGPETDPATV 498 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 +I + I ++ TV L+NY K G F +L H+ P+R+ GEV + + V LD Sbjct: 499 RKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQLD 550
>gi|24899168|dbj|BAC23098.1| phototropin [Vicia faba] Length = 963 Score = 117 bits (294), Expect = 5e-26 Identities = 58/112 (51%), Positives = 77/112 (68%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT YSREEILG NCRFL GP T + Sbjct: 437 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATV 496 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 ++I I ++ TV L+NY K G F +L H+ P+R+ GEV + + V LD Sbjct: 497 KKIRYAIDNQTEVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLD 548
Score = 93.2 bits (230), Expect = 1e-18 Identities = 44/111 (39%), Positives = 72/111 (64%) Frame = +1 Query: 85 GIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNG 264 GIP +S L +L +Q+FV++D PD PI+YAS F S+TGY+ +E++G NCRF+ G Sbjct: 144 GIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFSMTGYTSKEVIGRNCRFMQG 203 Query: 265 PGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEV 417 T + +I + + + + LLNY+K G++F +LL I+PI++ G++ Sbjct: 204 ADTDPNDVAKIREALAAGTSYCGRLLNYKKDGTTFWNLLTIAPIKDEHGKI 254
>gi|20260484|gb|AAM13140.1| unknown protein [Arabidopsis thaliana] Length = 549 Score = 117 bits (292), Expect = 9e-26 Identities = 56/112 (50%), Positives = 77/112 (68%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV++DP LPD PII+ASD+FL LT YSREEILG NCRFL GP T + Sbjct: 380 LATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDQATV 439 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 ++I I ++ TV L+NY K G F +L H+ P+R+ GE+ + + V LD Sbjct: 440 QKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLD 491
Score = 92.0 bits (227), Expect = 3e-18 Identities = 47/128 (36%), Positives = 77/128 (60%) Frame = +1 Query: 76 DSVGIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRF 255 +S P +S L +L ++Q+FV++D P PI+YAS F ++TGYS +EI+G NCRF Sbjct: 113 ESGAFPRVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRF 172 Query: 256 LNGPGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWV 435 L GP T + +I + + ++ LLNY+K G+ F +LL ++PI++ G + + Sbjct: 173 LQGPDTDKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGM 232 Query: 436 HLDEGAKY 459 + E +KY Sbjct: 233 QV-EVSKY 239
>gi|18424070|ref|NP_568874.1| non phototropic hypocotyl 1-like; protein id: At5g58140.1, supported by cDNA: gi_5391441 [Arabidopsis thaliana] gi|11358837|pir||T51600 serine/threonine protein kinase (EC 2.7.1.-), nonphototropic hypocotyl protein 1-like [similarity] - Arabidopsis thaliana gi|5391442|gb|AAC27293.2| non phototropic hypocotyl 1-like [Arabidopsis thaliana] Length = 915 Score = 117 bits (292), Expect = 9e-26 Identities = 56/112 (50%), Positives = 77/112 (68%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV++DP LPD PII+ASD+FL LT YSREEILG NCRFL GP T + Sbjct: 380 LATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDQATV 439 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 ++I I ++ TV L+NY K G F +L H+ P+R+ GE+ + + V LD Sbjct: 440 QKIRDAIRDQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLD 491
>gi|7489361|pir||T08033 serine/threonine protein kinase (EC 2.7.1.-) 1, nonphototropic hypocotyl protein 1-like [similarity] - oat gi|2754823|gb|AAC05083.1| NPH1-1 [Avena sativa] Length = 923 Score = 117 bits (292), Expect = 9e-26 Identities = 57/112 (50%), Positives = 76/112 (67%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT YSREEILG NCRFL GP T + Sbjct: 404 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATV 463 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 +I I ++ TV L+NY K G F +L H+ P+R+ G+V + + V LD Sbjct: 464 RKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLD 515
Score = 91.7 bits (226), Expect = 4e-18 Identities = 47/124 (37%), Positives = 76/124 (61%) Frame = +1 Query: 88 IPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGP 267 IP +S L +L +Q+FV++D P PI+YAS F ++TGY+ +E++G NCRFL G Sbjct: 120 IPRVSEELRAALSAFQQTFVVSDASRPGHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGS 179 Query: 268 GTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDE 447 GT + +I Q + + +LNY+K G++F +LL I+PI++ G V + + + E Sbjct: 180 GTDPAEIAKIRQALANGSNYCGRVLNYKKDGTAFWNLLTIAPIKDEEGRVLKFIGMQV-E 238 Query: 448 GAKY 459 +KY Sbjct: 239 VSKY 242
>gi|6688928|emb|CAB65325.1| non-phototropic hypocotyl NPH1 [Oryza sativa (indica cultivar-group)] Length = 921 Score = 117 bits (292), Expect = 9e-26 Identities = 56/112 (50%), Positives = 77/112 (68%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT Y+REEILG NCRFL GP T ++ Sbjct: 404 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRAIV 463 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 +I I ++ TV L+NY K G F +L H+ P+R+ G+V + + V LD Sbjct: 464 RKIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLD 515
Score = 92.4 bits (228), Expect = 2e-18 Identities = 46/127 (36%), Positives = 78/127 (61%) Frame = +1 Query: 79 SVGIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFL 258 + IP +S L +L +Q+FV++D P+ PI+YAS F ++TGY+ +E++G NCRFL Sbjct: 117 AAAIPRVSEELRAALSAFQQTFVVSDATRPNHPIMYASAGFFNMTGYTSKEVVGRNCRFL 176 Query: 259 NGPGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVH 438 G GT +++I Q + + +LNY+K G+ F +LL I+PI++ G + + + Sbjct: 177 QGSGTDPHEIDKIRQALANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQ 236 Query: 439 LDEGAKY 459 + E +KY Sbjct: 237 V-EVSKY 242
>gi|7489362|pir||T08034 serine/threonine protein kinase (EC 2.7.1.-) 2, nonphototropic hypocotyl protein 1-like [similarity] - oat gi|2754825|gb|AAC05084.1| NPH1-2 [Avena sativa] Length = 927 Score = 117 bits (292), Expect = 9e-26 Identities = 57/112 (50%), Positives = 76/112 (67%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT YSREEILG NCRFL GP T + Sbjct: 407 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATV 466 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 +I I ++ TV L+NY K G F +L H+ P+R+ G+V + + V LD Sbjct: 467 RKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLD 518
Score = 91.3 bits (225), Expect = 5e-18 Identities = 47/124 (37%), Positives = 75/124 (60%) Frame = +1 Query: 88 IPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGP 267 IP +S L +L +Q+FV++D P PI+YAS F ++TGY+ +E++G NCRFL G Sbjct: 123 IPRVSEELRAALSAFQQTFVVSDASRPGHPIMYASAGFFNMTGYTSKEVVGRNCRFLQGS 182 Query: 268 GTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDE 447 GT + +I Q + +LNY+K G++F +LL I+PI++ G V + + + E Sbjct: 183 GTDPAEIAKIRQALADGSNYCGRVLNYKKDGTAFWNLLTIAPIKDEEGRVLKFIGMQV-E 241 Query: 448 GAKY 459 +KY Sbjct: 242 VSKY 245
>gi|6006310|dbj|BAA84779.1| nonphototrophic hypocotyl 1b [Oryza sativa (japonica cultivar-group)] Length = 907 Score = 117 bits (292), Expect = 9e-26 Identities = 55/112 (49%), Positives = 78/112 (69%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP +PD PII+ASD+FL LT Y+REEILG NCRFL GP T + Sbjct: 379 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQGTV 438 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 ++I + I ++ TV L+NY K G F +L H+ P+R+ GE+ + + V LD Sbjct: 439 DKIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLD 490
Score = 98.2 bits (243), Expect = 4e-20 Identities = 51/130 (39%), Positives = 80/130 (61%) Frame = +1 Query: 70 RCDSVGIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNC 249 R +P +S L +L ++Q+FV++D PD PIIYAS+ F ++TGYS E++G NC Sbjct: 80 RASHDSLPRVSQELKDALSSLQQTFVVSDATRPDCPIIYASEGFFTMTGYSPREVVGRNC 139 Query: 250 RFLNGPGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHV 429 RFL GP T + +I + ++ LLNYRK G+ F +LL ++PIR+ +G+V + Sbjct: 140 RFLQGPDTDAAEVAKIRDAVKHGRSFCGRLLNYRKDGAPFWNLLTVTPIRDDNGKVIKFI 199 Query: 430 WVHLDEGAKY 459 + + E +KY Sbjct: 200 GMQV-EVSKY 208
>gi|6006312|dbj|BAA84780.1| nonphototrophic hypocotyl 1a [Oryza sativa (japonica cultivar-group)] Length = 921 Score = 115 bits (289), Expect = 2e-25 Identities = 56/112 (50%), Positives = 76/112 (67%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT Y+REEILG NCRFL GP T + Sbjct: 404 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRATV 463 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 +I I ++ TV L+NY K G F +L H+ P+R+ G+V + + V LD Sbjct: 464 RKIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLD 515
Score = 91.7 bits (226), Expect = 4e-18 Identities = 46/127 (36%), Positives = 78/127 (61%) Frame = +1 Query: 79 SVGIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFL 258 + IP +S L +L +Q+FV++D P+ PI+YAS F ++TGY+ +E++G NCRFL Sbjct: 117 AAAIPRVSEELRAALSVFQQTFVVSDATHPNHPIMYASAGFFNMTGYTSKEVVGRNCRFL 176 Query: 259 NGPGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVH 438 G GT +++I Q + + +LNY+K G+ F +LL I+PI++ G + + + Sbjct: 177 QGSGTDPHEIDKIRQSLANGSNYCGRILNYKKDGTPFWNLLTIAPIKDEDGRLLKFIGMQ 236 Query: 439 LDEGAKY 459 + E +KY Sbjct: 237 V-EVSKY 242
>gi|24899170|dbj|BAC23099.1| phototropin [Vicia faba] Length = 970 Score = 115 bits (289), Expect = 2e-25 Identities = 57/112 (50%), Positives = 76/112 (67%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT YSREEILG NCRFL G T + Sbjct: 433 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQGQETDPATV 492 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 +I + I ++ TV L+NY K G F +L H+ P+R+ GEV + + V LD Sbjct: 493 RKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQLD 544
Score = 91.3 bits (225), Expect = 5e-18 Identities = 46/114 (40%), Positives = 69/114 (60%) Frame = +1 Query: 76 DSVGIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRF 255 D G P +S L +L +Q+FV++D PD PI+YAS F +TGY+ +E++G NCRF Sbjct: 140 DPRGFPRVSDDLKDALSAFQQTFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRF 199 Query: 256 LNGPGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEV 417 L G T + +I + + ++ LLNY+K G+ F +LL ISPI++ G V Sbjct: 200 LQGADTDPNDVARIREALEGGKSFCGRLLNYKKDGTPFWNLLTISPIKDDDGNV 253
>gi|541825|pir||S42868 serine/threonine protein kinase (EC 2.7.1.-), nonphototropic hypocotyl protein 1-like [similarity] - spinach (fragment) gi|457711|emb|CAA82993.1| protein kinase [Spinacia oleracea] Length = 724 Score = 115 bits (287), Expect = 3e-25 Identities = 55/112 (49%), Positives = 77/112 (68%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV++DP LPD PII+ASD+FL LT Y+REEILG NCRFL GP T + Sbjct: 194 LATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQTTV 253 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 ++I I ++ TV L+NY K G F +L H+ P+R+ GE+ + + V LD Sbjct: 254 QKIRDAIKEQRDITVQLINYTKSGRKFWNLFHLQPMRDQKGELQYFIGVQLD 305
>gi|7489818|pir||T01353 serine/threonine protein kinase (EC 2.7.1.-), nonphototropic hypocotyl protein 1-like [similarity] - maize gi|2687358|gb|AAB88817.1| nonphototropic hypocotyl 1 [Zea mays] Length = 911 Score = 114 bits (286), Expect = 4e-25 Identities = 56/112 (50%), Positives = 76/112 (67%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT Y REEILG NCRFL GP T + Sbjct: 392 LATTLERIEKNFVITDPRLPDNPIIFASDSFLRLTEYCREEILGRNCRFLQGPETDRGTV 451 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 ++I I ++ TV L+NY K G F +L H+ P+R+ G+V + + V LD Sbjct: 452 KKIRDAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLD 503
Score = 93.6 bits (231), Expect = 1e-18 Identities = 47/124 (37%), Positives = 75/124 (60%) Frame = +1 Query: 88 IPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGP 267 +P +S L +L +Q+FV++D PD PI+YAS F ++TGYS E++G NCRFL G Sbjct: 111 LPRVSEELRAALSAFQQTFVVSDATRPDHPILYASAGFFNMTGYSSNEVVGRNCRFLQGS 170 Query: 268 GTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDE 447 GT + +I Q + + +LNY+K G+ F +LL ++PI++ G V + + + E Sbjct: 171 GTDPVEISKIRQALAAGSNYCGRILNYKKDGTPFWNLLTVAPIKDEDGRVLKFIGMQV-E 229 Query: 448 GAKY 459 +KY Sbjct: 230 VSKY 233
>gi|20797097|emb|CAC94941.1| putative blue light receptor [Chlamydomonas reinhardtii] Length = 749 Score = 114 bits (284), Expect = 7e-25 Identities = 56/122 (45%), Positives = 79/122 (64%) Frame = +1 Query: 91 PALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPG 270 P ++ L ++ RI+Q+F ++DP LPD PI++ASDAFL LTGYSREE+LG NCRFL G G Sbjct: 198 PRVALDLATTVERIQQNFCISDPTLPDCPIVFASDAFLELTGYSREEVLGRNCRFLQGAG 257 Query: 271 TSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEG 450 T ++QI I TV +LNY K G +F ++ ++P+R+ G F V V +D Sbjct: 258 TDRGTVDQIRAAIKEGSELTVRILNYTKAGKAFWNMFTLAPMRDQDGHARFFVGVQVDVT 317 Query: 451 AK 456 A+ Sbjct: 318 AQ 319
Score = 113 bits (282), Expect = 1e-24 Identities = 55/130 (42%), Positives = 83/130 (63%) Frame = +1 Query: 85 GIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNG 264 G+PA +S L L ++ +FV+ D LPD P++YAS+ F ++TGY +E+LG NCRFL G Sbjct: 3 GVPAPASQLTKVLAGLRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQG 62 Query: 265 PGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 GT + +++I I +AC+V LLNYRK G+ F +LL ++PI+ G V+ V V +D Sbjct: 63 EGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPFWNLLTVTPIKTPDGRVSKFVGVQVD 122 Query: 445 EGAKYDFNGL 474 +K + L Sbjct: 123 VTSKTEGKAL 132
>gi|20797092|emb|CAC94940.1| putative blue light receptor [Chlamydomonas reinhardtii] Length = 750 Score = 114 bits (284), Expect = 7e-25 Identities = 56/122 (45%), Positives = 79/122 (64%) Frame = +1 Query: 91 PALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPG 270 P ++ L ++ RI+Q+F ++DP LPD PI++ASDAFL LTGYSREE+LG NCRFL G G Sbjct: 198 PRVALDLATTVERIQQNFCISDPTLPDCPIVFASDAFLELTGYSREEVLGRNCRFLQGAG 257 Query: 271 TSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEG 450 T ++QI I TV +LNY K G +F ++ ++P+R+ G F V V +D Sbjct: 258 TDRGTVDQIRAAIKEGSELTVRILNYTKAGKAFWNMFTLAPMRDQDGHARFFVGVQVDVT 317 Query: 451 AK 456 A+ Sbjct: 318 AQ 319
>gi|19570333|dbj|BAA36192.2| PHY3 [Adiantum capillus-veneris] Length = 1465 Score = 109 bits (272), Expect = 2e-23 Identities = 53/109 (48%), Positives = 75/109 (68%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI +SFV+TDP LPD PII+ASD FL LT Y+REE+LG NCRFL G GT + + Sbjct: 920 LATTLERIGKSFVITDPRLPDNPIIFASDRFLELTEYTREEVLGNNCRFLQGRGTDRKAV 979 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWV 435 + I + ++ TV +LNY KGG +F +L H+ +R+ +G+V + + V Sbjct: 980 QLIRDAVKEQRDVTVQVLNYTKGGRAFWNLFHLQVMRDENGDVQYFIGV 1028
Score = 85.9 bits (211), Expect = 2e-16 Identities = 48/108 (44%), Positives = 65/108 (60%), Gaps = 1/108 (0%) Frame = +1 Query: 139 SFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHICSE 318 SF++ D PD PIIYAS F +LTGY+ E++G NCRFL GP T+ + I + + Sbjct: 676 SFIVVDALKPDFPIIYASTGFFNLTGYTSREVIGGNCRFLQGPDTNPADVASIREALAQG 735 Query: 319 QACTV-HLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKY 459 LLNYRK GSSF +LL I+PI++ G + + V L E +KY Sbjct: 736 TGTFCGRLLNYRKDGSSFWNLLTIAPIKDDLGSIVKLIGVQL-EVSKY 782
>gi|7522091|pir||T30891 PHY3 protein - maidenhair fern Length = 1465 Score = 109 bits (272), Expect = 2e-23 Identities = 53/109 (48%), Positives = 75/109 (68%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI +SFV+TDP LPD PII+ASD FL LT Y+REE+LG NCRFL G GT + + Sbjct: 920 LATTLERIGKSFVITDPRLPDNPIIFASDRFLELTEYTREEVLGNNCRFLQGRGTDRKAV 979 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWV 435 + I + ++ TV +LNY KGG +F +L H+ +R+ +G+V + + V Sbjct: 980 QLIRDAVKEQRDVTVQVLNYTKGGRAFWNLFHLQVMRDENGDVQYFIGV 1028
>gi|541818|pir||S42866 serine/threonine protein kinase (EC 2.7.1.-), nonphototropic hypocotyl protein 1-like [similarity] - common ice plant (fragment) gi|457693|emb|CAA82994.1| protein kinase [Mesembryanthemum crystallinum] Length = 572 Score = 106 bits (264), Expect = 2e-22 Identities = 54/112 (48%), Positives = 73/112 (65%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L RI+++FV+TDP LPD PII+ASD+FL LT +SR EIL N RFL GP T + Sbjct: 42 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEFSRAEILARNRRFLQGPETDPATV 101 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 +I I +E TV L+NY K G F ++ H+ P+R+ GEV + + V LD Sbjct: 102 AKIRDAIDNETDVTVQLINYTKTGKKFWNVFHLQPMRDQKGEVQYFIGVQLD 153
>gi|21730387|pdb|1JNU|A Chain A, Photoexcited Structure Of The Plant Photoreceptor Domain, Phy3 Lov2 gi|21730388|pdb|1JNU|B Chain B, Photoexcited Structure Of The Plant Photoreceptor Domain, Phy3 Lov2 gi|21730389|pdb|1JNU|C Chain C, Photoexcited Structure Of The Plant Photoreceptor Domain, Phy3 Lov2 gi|21730390|pdb|1JNU|D Chain D, Photoexcited Structure Of The Plant Photoreceptor Domain, Phy3 Lov2 gi|13786959|pdb|1G28|A Chain A, Structure Of A Flavin-Binding Domain, Lov2, From The Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3 gi|13786960|pdb|1G28|B Chain B, Structure Of A Flavin-Binding Domain, Lov2, From The Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3 gi|13786961|pdb|1G28|C Chain C, Structure Of A Flavin-Binding Domain, Lov2, From The Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3 gi|13786962|pdb|1G28|D Chain D, Structure Of A Flavin-Binding Domain, Lov2, From The Chimeric PhytochromePHOTOTROPIN PHOTORECEPTOR PHY3 Length = 104 Score = 105 bits (261), Expect = 3e-22 Identities = 49/100 (49%), Positives = 70/100 (70%) Frame = +1 Query: 136 QSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHICS 315 +SFV+TDP LPD PII+ASD FL LT Y+REE+LG NCRFL G GT + ++ I + Sbjct: 1 KSFVITDPRLPDNPIIFASDRFLELTEYTREEVLGNNCRFLQGRGTDRKAVQLIRDAVKE 60 Query: 316 EQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWV 435 ++ TV +LNY KGG +F +L H+ +R+ +G+V + + V Sbjct: 61 QRDVTVQVLNYTKGGRAFWNLFHLQVMRDENGDVQYFIGV 100
>gi|23012145|gb|ZP_00052303.1| hypothetical protein [Magnetospirillum magnetotacticum] Length = 365 Score = 102 bits (255), Expect = 2e-21 Identities = 48/109 (44%), Positives = 71/109 (65%) Frame = +1 Query: 133 KQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHIC 312 + + ++TDP+ D PI+YA+DAFL LTGY+R E+ G NCRFL GP T ++ + +I I Sbjct: 40 RMAMIITDPNRLDNPIVYANDAFLRLTGYTRLEVTGRNCRFLQGPDTDLDAVARIRAAIA 99 Query: 313 SEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKY 459 SE+ V LLNYRK GS+F + ++ISP+ + G + F LD ++ Sbjct: 100 SERDVQVELLNYRKDGSTFHNAVYISPVHDEDGTLLFFFASQLDVSERH 148
>gi|17989024|ref|NP_541657.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Brucella melitensis] gi|25526934|pir||AF3594 sensory transduction histidine kinase (EC 2.7.3.-) [imported] - Brucella melitensis (strain 16M) gi|17984864|gb|AAL53921.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Brucella melitensis] Length = 489 Score = 100 bits (248), Expect = 1e-20 Identities = 45/100 (45%), Positives = 66/100 (66%) Frame = +1 Query: 145 VLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHICSEQA 324 ++T+PHLPD PI++A+ AFL LTGY +E++G NCRFL G GT + I I +E+ Sbjct: 35 LITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKP 94 Query: 325 CTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 + ++NY+K G +F + LHISP+ NA+G + V LD Sbjct: 95 IDIDIINYKKSGEAFWNRLHISPVHNANGRLQHFVSSQLD 134
>gi|23500332|ref|NP_699772.1| sensory box protein [Brucella suis 1330] gi|23463946|gb|AAN33777.1|AE014555_7 sensory box protein [Brucella suis 1330] Length = 463 Score = 100 bits (248), Expect = 1e-20 Identities = 45/100 (45%), Positives = 66/100 (66%) Frame = +1 Query: 145 VLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHICSEQA 324 ++T+PHLPD PI++A+ AFL LTGY +E++G NCRFL G GT + I I +E+ Sbjct: 9 LITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKP 68 Query: 325 CTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 + ++NY+K G +F + LHISP+ NA+G + V LD Sbjct: 69 IDIDIINYKKSGEAFWNRLHISPVHNANGRLQHFVSSQLD 108
>gi|16124540|ref|NP_419104.1| sensory box histidine kinase [Caulobacter crescentus CB15] gi|25398646|pir||D87284 sensory box histidine kinase [imported] - Caulobacter crescentus gi|13421422|gb|AAK22272.1| sensory box histidine kinase [Caulobacter crescentus CB15] Length = 449 Score = 99.4 bits (246), Expect = 2e-20 Identities = 43/109 (39%), Positives = 72/109 (66%) Frame = +1 Query: 118 SLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQI 297 ++ + + ++ D PD+PII+A+DAFL LTGY+R+E++G NCRFL GP T + ++ + Sbjct: 108 AISATRMAMIVADATQPDIPIIFANDAFLRLTGYARDEVIGRNCRFLQGPDTDPKAIQAV 167 Query: 298 NQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 + + + V LLNYRK GS F + L++SP+RN +G++ + +D Sbjct: 168 RDALAAGEDVAVDLLNYRKDGSPFWNALNMSPVRNDAGQLVYFFGSQVD 216
>gi|23468757|gb|ZP_00124092.1| hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 534 Score = 99.4 bits (246), Expect = 2e-20 Identities = 50/125 (40%), Positives = 73/125 (58%) Frame = +1 Query: 133 KQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHIC 312 + ++TDP+ PD PII+A+ AFL +TGY+ EEI+G NCRFL GP T ++ I I Sbjct: 32 RMPMIVTDPNRPDNPIIFANRAFLEMTGYASEEIIGSNCRFLQGPDTDRTAVQSIRDAID 91 Query: 313 SEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKYDFNGLTPEVWQ 492 + +LNYRK GSSF + L ISP+ N +GE+ + LD + D + + Sbjct: 92 QRVDISTEILNYRKDGSSFWNALFISPVYNDAGELIYFFASQLDISRRRDAEEALRQAQK 151 Query: 493 LGAVG 507 + A+G Sbjct: 152 MEALG 156
>gi|21243288|ref|NP_642870.1| sensor histidine kinase [Xanthomonas axonopodis pv. citri str. 306] gi|21108826|gb|AAM37406.1| sensor histidine kinase [Xanthomonas axonopodis pv. citri str. 306] Length = 540 Score = 98.6 bits (244), Expect = 3e-20 Identities = 47/125 (37%), Positives = 72/125 (57%) Frame = +1 Query: 133 KQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHIC 312 + +TDPHLPD PI++A+ AFL +TGY+ +E++G NCRFL GP T + + + I Sbjct: 38 RMPMTVTDPHLPDNPIVFANRAFLEMTGYAADEVIGNNCRFLQGPETDPASISDVRESIE 97 Query: 313 SEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKYDFNGLTPEVWQ 492 S + +LNYRK GSSF + L ISP+ + G + + LD + D + + Sbjct: 98 SRREFATEVLNYRKDGSSFWNALFISPVFDDKGNLVYFFGSQLDVSRRRDAEDALRQAQK 157 Query: 493 LGAVG 507 + A+G Sbjct: 158 MEALG 162
>gi|21231858|ref|NP_637775.1| sensor histidine kinase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|21113578|gb|AAM41699.1| sensor histidine kinase [Xanthomonas campestris pv. campestris str. ATCC 33913] Length = 540 Score = 95.5 bits (236), Expect = 3e-19 Identities = 44/125 (35%), Positives = 75/125 (60%) Frame = +1 Query: 133 KQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHIC 312 + +TDP+LPD PI++A+ AFL +TGY+ +EI+G NCRFL GP T + + + + I Sbjct: 38 RMPMTVTDPYLPDNPIVFANRAFLEMTGYAADEIIGNNCRFLQGPETDRQAVADVREAID 97 Query: 313 SEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKYDFNGLTPEVWQ 492 + + +LNYRK GS+F + L +SP+ + +G++ + LD + D + + Sbjct: 98 NRREFATEVLNYRKDGSTFWNALFVSPVFDDTGKLVYFFGSQLDVSRRRDAEDALRQAQK 157 Query: 493 LGAVG 507 + A+G Sbjct: 158 MEALG 162
>gi|23010750|gb|ZP_00051334.1| hypothetical protein [Magnetospirillum magnetotacticum] Length = 454 Score = 93.6 bits (231), Expect = 1e-18 Identities = 41/104 (39%), Positives = 63/104 (60%) Frame = +1 Query: 133 KQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHIC 312 + V+ DPH D PI++ + AFL +TGY+REE++G NCR L GP T + + I Sbjct: 69 RMPMVVVDPHRDDCPIVFVNQAFLEMTGYTREEVIGRNCRLLQGPDTDPAARMAVREAIA 128 Query: 313 SEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 + + +LNYRK G+SF + L +SP+ NA+G++ + LD Sbjct: 129 QRRDIAIEILNYRKDGASFWNALFVSPVYNAAGDLVYLFGSQLD 172
>gi|23109511|gb|ZP_00095689.1| hypothetical protein [Novosphingobium aromaticivorans] Length = 473 Score = 92.8 bits (229), Expect = 2e-18 Identities = 41/102 (40%), Positives = 63/102 (61%) Frame = +1 Query: 118 SLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQI 297 ++ + + + L DPH D+PI++A+ AF LTGY E++G NCRFL GPGT + +I Sbjct: 158 AMAQTRMAICLCDPHEKDLPIVFANRAFRHLTGYDEHEVVGRNCRFLQGPGTDPAAVARI 217 Query: 298 NQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAF 423 + E V LLNYRK G++F + LH+ P+ +A G + + Sbjct: 218 KAALEREDVIVVELLNYRKDGTAFWNALHLGPVYDADGRLIY 259
>gi|23106787|gb|ZP_00093141.1| hypothetical protein [Novosphingobium aromaticivorans] Length = 244 Score = 92.4 bits (228), Expect = 2e-18 Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 6/123 (4%) Frame = +1 Query: 145 VLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHICSEQA 324 V+++P LPD PII +DAF+ LTGY+REEI+G NCRFL G GT + + I +Q Sbjct: 63 VISNPRLPDNPIIACNDAFVELTGYAREEIIGRNCRFLRGSGTEDDKARILRDGIWRKQP 122 Query: 325 CTVHLLNYRKGGSSFRDLLHISPIRNASGEVAF----HVWVHLDEGAKYDF--NGLTPEV 486 V ++NY+K G+ FR+ + ++PI +A GEV + V + D+G D NG V Sbjct: 123 VMVEIVNYKKDGTRFRNAVMVAPIFDADGEVEYFLGSQVEIAEDQGQANDARRNGAAERV 182 Query: 487 WQL 495 +L Sbjct: 183 ERL 185
>gi|16080086|ref|NP_390912.1| similar to protein kinase [Bacillus subtilis] gi|20138874|sp|O34627|PHOT_BACSU Blue-light photoreceptor (Photoactive flavo- yellow protein) (Phototropin homolog) gi|7475781|pir||A70002 protein kinase homolog ytvA - Bacillus subtilis gi|2293304|gb|AAC00382.1| putative protein kinase [Bacillus subtilis] gi|2635518|emb|CAB15012.1| similar to protein kinase [Bacillus subtilis] Length = 261 Score = 84.7 bits (208), Expect = 5e-16 Identities = 41/106 (38%), Positives = 62/106 (58%) Frame = +1 Query: 79 SVGIPALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFL 258 S GIP + +L ++ V+TDP L D PI+Y + F+ +TGY EEILG NCRFL Sbjct: 6 SFGIPGQLEVIKKALDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFL 65 Query: 259 NGPGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPI 396 G T ++ I + +++ TV + NY+K G+ F + L+I P+ Sbjct: 66 QGKHTDPAEVDNIRTALQNKEPVTVQIQNYKKDGTMFWNELNIDPM 111
>gi|17230367|ref|NP_486915.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120] gi|25531573|pir||AD2165 two-component hybrid sensor and regulator all2875 [imported] - Nostoc sp. (strain PCC 7120) gi|17131969|dbj|BAB74574.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120] Length = 1817 Score = 84.0 bits (206), Expect = 8e-16 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 3/136 (2%) Frame = +1 Query: 46 TGLVVCGKRCDSVGIPALSSSLNL---SLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTG 216 T +++ G D + + +L L +L V++D LP P+IY + AF +TG Sbjct: 416 TPVMLRGFMFDITDLKRVEETLRLRERALAASSNGIVISDAKLPHYPVIYVNSAFEQITG 475 Query: 217 YSREEILGCNCRFLNGPGTSVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPI 396 Y E++G NCRFL G T +E++ + + + C V L NYRK GS F + L +SPI Sbjct: 476 YKATEVVGRNCRFLLGNDTQQSAIEELRSALKAGKNCKVILRNYRKDGSLFWNQLSVSPI 535 Query: 397 RNASGEVAFHVWVHLD 444 N +G+++ + + D Sbjct: 536 YNDNGQLSHFIGIQTD 551
>gi|14917059|sp|Q01371|WC1_NEUCR White collar 1 protein (WC1) gi|5441498|emb|CAA63964.2| wc-1 [Neurospora crassa] Length = 1167 Score = 80.5 bits (197), Expect = 9e-15 Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 13/123 (10%) Frame = +1 Query: 115 LSLGRIKQS--FVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGP------G 270 L LG + S FV+ D L D PIIY SD F +LTGYSR EI+G NCRFL P G Sbjct: 382 LKLGAVDMSCAFVVCDVTLNDCPIIYVSDNFQNLTGYSRHEIVGRNCRFLQAPDGNVEAG 441 Query: 271 TSVEVLEQ-----INQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWV 435 T E +E + + I Q L+NYRKGG F +LL + PI + E+ + + Sbjct: 442 TKREFVENNAVYTLKKTIAEGQEIQQSLINYRKGGKPFLNLLTMIPIPWDTEEIRYFIGF 501 Query: 436 HLD 444 +D Sbjct: 502 QID 504
>gi|7493974|pir||S69206 regulator protein white collar 1 - Neurospora crassa Length = 1154 Score = 80.5 bits (197), Expect = 9e-15 Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 13/123 (10%) Frame = +1 Query: 115 LSLGRIKQS--FVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGP------G 270 L LG + S FV+ D L D PIIY SD F +LTGYSR EI+G NCRFL P G Sbjct: 382 LKLGAVDMSCAFVVCDVTLNDCPIIYVSDNFQNLTGYSRHEIVGRNCRFLQAPDGNVEAG 441 Query: 271 TSVEVLEQ-----INQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWV 435 T E +E + + I Q L+NYRKGG F +LL + PI + E+ + + Sbjct: 442 TKREFVENNAVYTLKKTIAEGQEIQQSLINYRKGGKPFLNLLTMIPIPWDTEEIRYFIGF 501 Query: 436 HLD 444 +D Sbjct: 502 QID 504
>gi|22298825|ref|NP_682072.1| two-component hybrid sensor and regulator [Thermosynechococcus elongatus BP-1] gi|22295006|dbj|BAC08834.1| two-component hybrid sensor and regulator [Thermosynechococcus elongatus BP-1] Length = 1353 Score = 79.3 bits (194), Expect = 2e-14 Identities = 42/100 (42%), Positives = 54/100 (54%) Frame = +1 Query: 145 VLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHICSEQA 324 V+TD PD P+IY + AF +TGY E++G NCRFL G I I Q+ Sbjct: 331 VITDYRQPDNPVIYVNPAFERMTGYRATEVIGKNCRFLQGSDRHQPGATAIRNAIKKGQS 390 Query: 325 CTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 C V L NYRK G F + L ISPI N GE+ ++ + D Sbjct: 391 CRVVLRNYRKNGQLFWNELAISPIYNEFGEITHYIGIQSD 430
>gi|6754424|ref|NP_034731.1| potassium voltage-gated channel, subfamily H (eag-related), member 3; ether a go-go like; ether-a-go-go-like [Mus musculus] gi|26006816|sp|Q9WVJ0|KCH3_MOUSE Potassium voltage-gated channel subfamily H member 3 (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (mElk2) gi|5163195|gb|AAD40578.1|AF109143_1 ether-a-go-go-like potassium channel [Mus musculus] Length = 1087 Score = 77.8 bits (190), Expect = 6e-14 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 3/121 (2%) Frame = +1 Query: 139 SFVLTDPHLPDM-PIIYASDAFLSLTGYSREEIL--GCNCRFLNGPGTSVEVLEQINQHI 309 +FVL + + + P++Y SD F LTG+SR E++ GC C FL GP TS V +QI + + Sbjct: 28 NFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKAL 87 Query: 310 CSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKYDFNGLTPEVW 489 + L+ YRK G F LL + PI+N GEVA + H D + G P+ W Sbjct: 88 DEHKEFKAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGG--PDNW 145 Query: 490 Q 492 + Sbjct: 146 K 146
>gi|8659557|ref|NP_058804.1| potassium voltage-gated channel, subfamily H (eag-related), member 3; BEC1 protein [Rattus norvegicus] gi|26006790|sp|O89047|KCH3_RAT Potassium voltage-gated channel subfamily H member 3 (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (rElk2) (Brain-specific eag-like channel 1) (BEC1) gi|7514050|pir||T31100 probable potassium channel 2 - rat gi|3702614|emb|CAA07586.1| ELK channel 2 [Rattus norvegicus] gi|5804786|dbj|BAA83591.1| BEC1 [Rattus norvegicus] Length = 1087 Score = 77.8 bits (190), Expect = 6e-14 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 3/121 (2%) Frame = +1 Query: 139 SFVLTDPHLPDM-PIIYASDAFLSLTGYSREEIL--GCNCRFLNGPGTSVEVLEQINQHI 309 +FVL + + + P++Y SD F LTG+SR E++ GC C FL GP TS V +QI + + Sbjct: 28 NFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKAL 87 Query: 310 CSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKYDFNGLTPEVW 489 + L+ YRK G F LL + PI+N GEVA + H D + G P+ W Sbjct: 88 DEHKEFKAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGG--PDNW 145 Query: 490 Q 492 + Sbjct: 146 K 146
>gi|23129382|gb|ZP_00111211.1| hypothetical protein [Nostoc punctiforme] Length = 1043 Score = 77.8 bits (190), Expect = 6e-14 Identities = 38/100 (38%), Positives = 58/100 (58%) Frame = +1 Query: 145 VLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHICSEQA 324 +LTDP+ PD PIIY + AF +TGY E++G NCRFL G L+++ I ++ Sbjct: 242 ILTDPNQPDNPIIYVNPAFELITGYCASEVIGRNCRFLQGNDLEQVALQELRSAIQEQRE 301 Query: 325 CTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 C V L NYRK F + L+++P+ + SG + + + D Sbjct: 302 CHVILRNYRKDNFLFWNELYLAPVFDNSGYLTNFIGIQTD 341
>gi|6331348|dbj|BAA86596.1| KIAA1282 protein [Homo sapiens] Length = 1117 Score = 77.8 bits (190), Expect = 6e-14 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 3/121 (2%) Frame = +1 Query: 139 SFVLTDPHLPDM-PIIYASDAFLSLTGYSREEIL--GCNCRFLNGPGTSVEVLEQINQHI 309 +FVL + + + P++Y SD F LTG+SR E++ GC C FL GP TS V +QI + + Sbjct: 62 NFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKAL 121 Query: 310 CSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKYDFNGLTPEVW 489 + L+ YRK G F LL + PI+N GEVA + H D + G P+ W Sbjct: 122 DEHKEFKAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGG--PDRW 179 Query: 490 Q 492 + Sbjct: 180 K 180
>gi|14757072|ref|XP_035483.1| similar to BEC1 [Homo sapiens] gi|26006814|sp|Q9ULD8|KCH3_HUMAN Potassium voltage-gated channel subfamily H member 3 (Ether-a-go-go-like potassium channel 2) (ELK channel 2) (ELK2) (Brain-specific eag-like channel 1) (BEC1) gi|5804784|dbj|BAA83590.1| BEC1 [Homo sapiens] Length = 1083 Score = 77.8 bits (190), Expect = 6e-14 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 3/121 (2%) Frame = +1 Query: 139 SFVLTDPHLPDM-PIIYASDAFLSLTGYSREEIL--GCNCRFLNGPGTSVEVLEQINQHI 309 +FVL + + + P++Y SD F LTG+SR E++ GC C FL GP TS V +QI + + Sbjct: 28 NFVLGNAQVAGLFPVVYCSDGFCDLTGFSRAEVMQRGCACSFLYGPDTSELVRQQIRKAL 87 Query: 310 CSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKYDFNGLTPEVW 489 + L+ YRK G F LL + PI+N GEVA + H D + G P+ W Sbjct: 88 DEHKEFKAELILYRKSGLPFWCLLDVIPIKNEKGEVALFLVSHKDISETKNRGG--PDRW 145 Query: 490 Q 492 + Sbjct: 146 K 146
>gi|16802841|ref|NP_464326.1| lmo0799 [Listeria monocytogenes EGD-e] gi|20138928|sp|P58724|PHOT_LISMO Blue-light photoreceptor (Phototropin homolog) gi|25516635|pir||AG1174 hypothetical protein lmo0799 [imported] - Listeria monocytogenes (strain EGD-e) gi|16410188|emb|CAC98877.1| lmo0799 [Listeria monocytogenes] Length = 253 Score = 77.4 bits (189), Expect = 8e-14 Identities = 45/120 (37%), Positives = 65/120 (54%) Frame = +1 Query: 106 SLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEV 285 +LNLS ++TDP D PII+ + F ++TGY++EE LG NC FL G T E Sbjct: 13 ALNLS----SVGVIITDPEQKDNPIIFVNTGFENITGYAKEEALGSNCHFLQGDDTDKEE 68 Query: 286 LEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKYDF 465 + +I I + V L NYRK G+SF + L I PI + E + V + D ++D+ Sbjct: 69 VAKIRHAINEKSTANVLLKNYRKDGTSFMNELTIEPIYD-DHEHLYFVGIQKDVTTEHDY 127
>gi|17230662|ref|NP_487210.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25530811|pir||AC2202 hypothetical protein alr3170 [imported] - Nostoc sp. (strain PCC 7120) gi|17132265|dbj|BAB74869.1| ORF_ID:alr3170~hypothetical protein [Nostoc sp. PCC 7120] Length = 1021 Score = 77.0 bits (188), Expect = 1e-13 Identities = 41/117 (35%), Positives = 66/117 (56%) Frame = +1 Query: 94 ALSSSLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGT 273 A S+ + L I VLTD + PD PIIY + AF ++TGYS E++G NCRFL T Sbjct: 199 APSNLMEQVLATISNGIVLTDANQPDNPIIYVNQAFETMTGYSAGEVIGQNCRFLQTNET 258 Query: 274 SVEVLEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLD 444 L ++ + ++ C V + N+RK G+ F + L+I+P+ ++ ++ + V D Sbjct: 259 DQPGLWELRSALREKKECHVIIKNFRKDGTEFWNELYIAPVFDSCEQLTHFIGVQND 315
>gi|9558434|dbj|BAB03370.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] Length = 308 Score = 76.3 bits (186), Expect = 2e-13 Identities = 38/103 (36%), Positives = 57/103 (55%) Frame = +1 Query: 118 SLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQI 297 +L + SF+LTDP +P PI+YAS SLTGY E+LG N R G T + + Sbjct: 133 ALDELPGSFILTDPAMPGHPIVYASRGLASLTGYPPREVLGRNARLFQGADTDRAAVAGV 192 Query: 298 NQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFH 426 + + ++ V +LNYR+ G + LLH++P+ +AS H Sbjct: 193 REAVRGQRPHQVSILNYRRDGEAHWVLLHLAPVFHASDGRVLH 235
>gi|16799866|ref|NP_470134.1| lin0792 [Listeria innocua] gi|20139027|sp|Q92DM1|PHOT_LISIN Blue-light photoreceptor (Phototropin homolog) gi|25517316|pir||AH1531 hypothetical protein lin0792 [imported] - Listeria innocua (strain Clip11262) gi|16413243|emb|CAC96024.1| lin0792 [Listeria innocua] Length = 253 Score = 75.5 bits (184), Expect = 3e-13 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 1/131 (0%) Frame = +1 Query: 106 SLNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEV 285 +LNLS ++TDP + PII+ + F ++TGY++EE +G NC FL G T E Sbjct: 13 ALNLS----SVGVIITDPEQKNNPIIFVNTGFENITGYTKEEAIGSNCHFLQGDDTDKEE 68 Query: 286 LEQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKYDF 465 + +I I + V L NYRK G+SF + L I PI + + + F V + D ++++ Sbjct: 69 VAKIRHAINEKSTANVLLKNYRKNGTSFMNELTIEPIYDDNDHLYF-VGIQKDVTTEHNY 127 Query: 466 N-GLTPEVWQL 495 L +W++ Sbjct: 128 QLELEKSLWEI 138
>gi|23098043|ref|NP_691509.1| protein kinase [Oceanobacillus iheyensis] gi|22776268|dbj|BAC12544.1| protein kinase [Oceanobacillus iheyensis] Length = 264 Score = 75.5 bits (184), Expect = 3e-13 Identities = 41/126 (32%), Positives = 66/126 (52%) Frame = +1 Query: 109 LNLSLGRIKQSFVLTDPHLPDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVL 288 L +L + ++TDP + D PI+ A+ FL LTGY EI+G NCRFL G T + Sbjct: 12 LEKALNYTRVGIIVTDPSIEDNPIVIANKGFLELTGYEEHEIIGKNCRFLQGKDTDNISI 71 Query: 289 EQINQHICSEQACTVHLLNYRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAKYDFN 468 +Q+ I +++ T+ + NY+K G+ F + L I H+W ++ KY F Sbjct: 72 KQLRDAIQNKEPITIQIYNYKKDGTGFWNELSID-----------HMWD--EQEGKYFFV 118 Query: 469 GLTPEV 486 G+ ++ Sbjct: 119 GVQKDI 124
>gi|22974082|gb|ZP_00020459.1| hypothetical protein [Chloroflexus aurantiacus] Length = 242 Score = 75.5 bits (184), Expect = 3e-13 Identities = 37/97 (38%), Positives = 56/97 (57%) Frame = +1 Query: 166 PDMPIIYASDAFLSLTGYSREEILGCNCRFLNGPGTSVEVLEQINQHICSEQACTVHLLN 345 PD PI + + AF ++TGY+ EE++G +C FL GPGT + +I + I + + LLN Sbjct: 54 PDYPITFVNRAFCTITGYAPEEVIGRHCLFLQGPGTDQAAVTRICEAIAAARPVHERLLN 113 Query: 346 YRKGGSSFRDLLHISPIRNASGEVAFHVWVHLDEGAK 456 YRK G F + ISP+R+ G V + + D A+ Sbjct: 114 YRKDGQPFWSQIAISPVRDDQGRVTAFIGLQTDVTAQ 150
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Dec 9, 2002 8:40 PM Number of letters in database: 397,579,747 Number of sequences in database: 1,247,039 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 375,887,068 Number of Sequences: 1247039 Number of extensions: 7764059 Number of successful extensions: 16674 Number of sequences better than 10.0: 387 Number of HSP's better than 10.0 without gapping: 16255 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16601 length of database: 397,579,747 effective HSP length: 114 effective length of database: 255,417,301 effective search space used: 14047951555 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
