BLASTX 2.2.5 [Nov-16-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1039725014-019163-13698

Query= 
         (183 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,247,039 sequences; 397,579,747 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs

Taxonomy reports

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15219327|ref|NP_173115.1|  unknown protein; protein id: A...    67   6e-11 
gi|25518555|pir||E86302  hypothetical protein F17F16.8 [impo...    67   6e-11 
gi|15230656|ref|NP_187904.1|  putative CREB-binding protein;...    54   6e-07 
gi|21105785|gb|AAM34790.1|AF512560_2  HAC4 [Arabidopsis thal...    50   8e-06 
gi|8778322|gb|AAF79331.1|AC002304_24  F14J16.27 [Arabidopsis...    50   8e-06 
gi|14794966|gb|AAK73519.1|  HAC4 [Arabidopsis thaliana]            50   8e-06 
gi|18405622|ref|NP_564706.1|  CREB-binding protein, putative...    50   8e-06 
gi|18412221|ref|NP_565197.1|  expressed protein; protein id:...    40   0.011 
gi|7487910|pir||T01055  hypothetical protein YUP8H12R.38 - A...    40   0.011 
gi|15240763|ref|NP_201549.1|  putative protein; protein id: ...    32   2.3   
gi|15021458|gb|AAK77735.1|AF369029_66  ORF66 [shrimp white s...    32   2.9   
gi|17158204|ref|NP_477622.1|  wsv100 [shrimp white spot synd...    32   2.9   
gi|19481748|gb|AAL89024.1|  WSSV156 [shrimp white spot syndr...    32   2.9   
gi|21537174|gb|AAM61515.1|  unknown [Arabidopsis thaliana]         30   6.6   
gi|18420081|ref|NP_568031.1|  putative protein; protein id: ...    30   6.6   
gi|7485765|pir||T04718  hypothetical protein F19F18.100 - Ar...    30   6.6   

Alignments


>gi|15219327|ref|NP_173115.1|   unknown protein; protein id: At1g16710.1 [Arabidopsis thaliana]
          Length = 1706

 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 33/53 (62%), Positives = 37/53 (69%)
 Frame = +3

Query: 3    MLQLHARACRDSGCNVPRCRDLKEHXXXXXXXXXXXXXAAVNEMMRQRAAEVA 161
            +LQLHARAC++S C+VPRC DLKEH             AAV EMMRQRAAEVA
Sbjct: 1650 LLQLHARACKESECDVPRCGDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVA 1702



>gi|25518555|pir||E86302   hypothetical protein F17F16.8 [imported] - Arabidopsis thaliana
 gi|9954734|gb|AAG09087.1|AC026237_8   Unknown Protein [Arabidopsis thaliana]
          Length = 1498

 Score = 67.0 bits (162), Expect = 6e-11
 Identities = 33/53 (62%), Positives = 37/53 (69%)
 Frame = +3

Query: 3    MLQLHARACRDSGCNVPRCRDLKEHXXXXXXXXXXXXXAAVNEMMRQRAAEVA 161
            +LQLHARAC++S C+VPRC DLKEH             AAV EMMRQRAAEVA
Sbjct: 1442 LLQLHARACKESECDVPRCGDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVA 1494



>gi|15230656|ref|NP_187904.1|   putative CREB-binding protein; protein id: At3g12980.1 [Arabidopsis
            thaliana]
 gi|15795129|dbj|BAB02507.1|   CREB-binding protein-like [Arabidopsis thaliana]
          Length = 1670

 Score = 53.9 bits (128), Expect = 6e-07
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = +3

Query: 3    MLQLHARACRDSGCNVPRCRDLKEHXXXXXXXXXXXXXAAVNEMMRQRAAEVAAN 167
            + +LH+R CRD  C VP+CR+L+ H             AAV EM+RQRAA+  A+
Sbjct: 1613 LFRLHSRNCRDPQCKVPKCRELRAHFSRKQQQADSRRRAAVMEMVRQRAADTTAS 1667



>gi|21105785|gb|AAM34790.1|AF512560_2   HAC4 [Arabidopsis thaliana]
          Length = 385

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 25/51 (49%), Positives = 30/51 (58%)
 Frame = +3

Query: 3   MLQLHARACRDSGCNVPRCRDLKEHXXXXXXXXXXXXXAAVNEMMRQRAAE 155
           +L+LHAR CRDS C VP+C  L+               AAV EMMR+RAAE
Sbjct: 330 LLKLHARNCRDSKCTVPKCSGLRAISRRKQQQADKRRRAAVMEMMRERAAE 380



>gi|8778322|gb|AAF79331.1|AC002304_24   F14J16.27 [Arabidopsis thaliana]
          Length = 1550

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 25/51 (49%), Positives = 30/51 (58%)
 Frame = +3

Query: 3    MLQLHARACRDSGCNVPRCRDLKEHXXXXXXXXXXXXXAAVNEMMRQRAAE 155
            +L+LHAR CRDS C VP+C  L+               AAV EMMR+RAAE
Sbjct: 1495 LLKLHARNCRDSKCTVPKCSGLRAISRRKQQQADKRRRAAVMEMMRERAAE 1545



>gi|14794966|gb|AAK73519.1|   HAC4 [Arabidopsis thaliana]
          Length = 413

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 25/51 (49%), Positives = 30/51 (58%)
 Frame = +3

Query: 3   MLQLHARACRDSGCNVPRCRDLKEHXXXXXXXXXXXXXAAVNEMMRQRAAE 155
           +L+LHAR CRDS C VP+C  L+               AAV EMMR+RAAE
Sbjct: 358 LLKLHARNCRDSKCTVPKCSGLRAISRRKQQQADKRRRAAVMEMMRERAAE 408



>gi|18405622|ref|NP_564706.1|   CREB-binding protein, putative; protein id: At1g55970.1, supported by
            cDNA: gi_14794965 [Arabidopsis thaliana]
          Length = 1456

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 25/51 (49%), Positives = 30/51 (58%)
 Frame = +3

Query: 3    MLQLHARACRDSGCNVPRCRDLKEHXXXXXXXXXXXXXAAVNEMMRQRAAE 155
            +L+LHAR CRDS C VP+C  L+               AAV EMMR+RAAE
Sbjct: 1401 LLKLHARNCRDSKCTVPKCSGLRAISRRKQQQADKRRRAAVMEMMRERAAE 1451



>gi|18412221|ref|NP_565197.1|   expressed protein; protein id: At1g79000.1, supported by cDNA:
            gi_12597460 [Arabidopsis thaliana]
 gi|12597461|gb|AAG60059.1|   p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
          Length = 1654

 Score = 39.7 bits (91), Expect = 0.011
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +3

Query: 3    MLQLHARACRDSGCNVPRCR 62
            +LQLHARAC++S C+VPRCR
Sbjct: 1635 LLQLHARACKESECHVPRCR 1654



>gi|7487910|pir||T01055   hypothetical protein YUP8H12R.38 - Arabidopsis thaliana
 gi|3152587|gb|AAC17068.1|   Similar to CREB-binding protein homolog gb|U88570 from D.
            melanogaster and contains similarity to callus-associated
            protein gb|U01961 from Nicotiana tabacum.  EST gb|W43427
            comes from this gene. [Arabidopsis thaliana]
          Length = 1516

 Score = 39.7 bits (91), Expect = 0.011
 Identities = 15/20 (75%), Positives = 19/20 (95%)
 Frame = +3

Query: 3    MLQLHARACRDSGCNVPRCR 62
            +LQLHARAC++S C+VPRCR
Sbjct: 1497 LLQLHARACKESECHVPRCR 1516



>gi|15240763|ref|NP_201549.1|   putative protein; protein id: At5g67480.1, supported by cDNA:
           gi_15529177, supported by cDNA: gi_17386119 [Arabidopsis
           thaliana]
 gi|9757869|dbj|BAB08456.1|   gene_id:K9I9.4~pir||T04718~strong similarity to unknown protein
           [Arabidopsis thaliana]
 gi|15529178|gb|AAK97683.1|   AT5g67480/K9I9_4 [Arabidopsis thaliana]
 gi|17386120|gb|AAL38606.1|AF446873_1   AT5g67480/K9I9_4 [Arabidopsis thaliana]
          Length = 372

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 3   MLQLHARACRDSG-CNVPRCRDLKE 74
           +L+LH+R C  S  C VP CR+LKE
Sbjct: 310 LLELHSRVCAGSDQCRVPLCRNLKE 334



>gi|15021458|gb|AAK77735.1|AF369029_66   ORF66 [shrimp white spot syndrome virus]
          Length = 624

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 3   MLQLHARACRDSGCNVPRCRD 65
           ML  H   CRD+ C+VP+CR+
Sbjct: 596 MLAYHYIVCRDASCDVPKCRE 616



>gi|17158204|ref|NP_477622.1|   wsv100 [shrimp white spot syndrome virus]
 gi|17016498|gb|AAL33104.1|   wsv100 [shrimp white spot syndrome virus]
          Length = 624

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 3   MLQLHARACRDSGCNVPRCRD 65
           ML  H   CRD+ C+VP+CR+
Sbjct: 596 MLAYHYIVCRDASCDVPKCRE 616



>gi|19481748|gb|AAL89024.1|   WSSV156 [shrimp white spot syndrome virus]
          Length = 624

 Score = 31.6 bits (70), Expect = 2.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 3   MLQLHARACRDSGCNVPRCRD 65
           ML  H   CRD+ C+VP+CR+
Sbjct: 596 MLAYHYIVCRDASCDVPKCRE 616



>gi|21537174|gb|AAM61515.1|   unknown [Arabidopsis thaliana]
          Length = 367

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +3

Query: 3   MLQLHARACRDS-GCNVPRCRDLKE 74
           +L+LH+R C DS  C VP C  LKE
Sbjct: 303 LLELHSRICVDSEQCKVPLCSSLKE 327



>gi|18420081|ref|NP_568031.1|   putative protein; protein id: At4g37610.1, supported by cDNA:
           122670. [Arabidopsis thaliana]
          Length = 368

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +3

Query: 3   MLQLHARACRDS-GCNVPRCRDLKE 74
           +L+LH+R C DS  C VP C  LKE
Sbjct: 304 LLELHSRICVDSEQCKVPLCSSLKE 328



>gi|7485765|pir||T04718   hypothetical protein F19F18.100 - Arabidopsis thaliana
 gi|4468986|emb|CAB38300.1|   putative protein [Arabidopsis thaliana]
 gi|7270743|emb|CAB80426.1|   putative protein [Arabidopsis thaliana]
          Length = 365

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = +3

Query: 3   MLQLHARACRDS-GCNVPRCRDLKE 74
           +L+LH+R C DS  C VP C  LKE
Sbjct: 301 LLELHSRICVDSEQCKVPLCSSLKE 325






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Dec 9, 2002  8:40 PM
  Number of letters in database: 397,579,747
  Number of sequences in database:  1,247,039
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,027,284
Number of Sequences: 1247039
Number of extensions: 1504687
Number of successful extensions: 4257
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4254
length of database: 397,579,747
effective HSP length: 36
effective length of database: 352,686,343
effective search space used: 8464472232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)