BLASTX 2.2.5 [Nov-16-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1039752506-029484-5568

Query= 
         (555 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,247,039 sequences; 397,579,747 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs

Taxonomy reports

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|16752157|ref|NP_445524.1|  hypothetical protein [Chlamydo...   102   4e-21 
gi|11282893|pir||F81737  hypothetical protein TC0129 [import...   100   1e-20 
gi|19920142|gb|AAM08574.1|AC092750_8  Hypothetical protein [...    72   3e-12 
gi|11282814|pir||G81737  hypothetical protein TC0130 [import...    63   2e-09 
gi|15834739|ref|NP_296498.1|  hypothetical protein [Chlamydi...    59   3e-08 
gi|22296323|dbj|BAC10094.1|  alcohol dehydrogenase-like prot...    54   9e-07 
gi|22296322|dbj|BAC10093.1|  alcohol dehydrogenase-like prot...    47   1e-04 
gi|7484267|pir||S59084  hypothetical protein 29.1 - red alga...    45   4e-04 
gi|13359451|dbj|BAB33421.1|  putative senescence-associated ...    38   0.085 
gi|22296324|dbj|BAC10095.1|  short chain alcohol dehydrogena...    37   0.11  
gi|22296325|dbj|BAC10096.1|  short chain alcohol dehydrogena...    36   0.32  
gi|21618306|gb|AAM67356.1|  unknown [Arabidopsis thaliana]         35   0.72  
gi|25283123|pir||H85039  probable alcohol dehydrogenase [imp...    35   0.72  
gi|18412155|ref|NP_567251.1|  putative alcohol dehydrogenase...    35   0.72  
gi|22296331|dbj|BAC10102.1|  alcohol dehydrogenase-like prot...    33   2.7   
gi|15921442|ref|NP_377111.1|  104aa long hypothetical protei...    33   2.7   
gi|15921441|ref|NP_377110.1|  62aa long conserved hypothetic...    33   2.7   
gi|17544995|ref|NP_518397.1|  PROBABLE ACETYL-COA ACETYLTRAN...    32   3.6   
gi|22296320|dbj|BAC10091.1|  similar to alcohol dehydrogenas...    32   4.7   
gi|22296321|dbj|BAC10092.1|  alcohol dehydrogenase-like prot...    32   4.7   
gi|21241463|ref|NP_641045.1|  conserved hypothetical protein...    32   6.1   
gi|22296335|dbj|BAC10106.1|  alcohol dehydrogenase-like prot...    32   6.1   
gi|23602121|ref|XP_147832.2|  similar to hypothetical protei...    32   6.1   
gi|19773874|gb|AAL98918.1|  IkBL [Rattus norvegicus]               32   6.1   
gi|22296332|dbj|BAC10103.1|  alcohol dehydrogenase-like prot...    31   8.0   
gi|22985250|gb|ZP_00030374.1|  hypothetical protein [Burkhol...    31   8.0   
gi|15230558|ref|NP_190736.1|  short-chain alcohol dehydrogen...    31   8.0   
gi|18138077|emb|CAD20601.2|  putative ES protein [Ostertagia...    31   8.0   

Alignments


>gi|16752157|ref|NP_445524.1|   hypothetical protein [Chlamydophila pneumoniae AR39]
 gi|11282894|pir||F81516   hypothetical protein CP0987 [imported] - Chlamydophila pneumoniae
           (strain AR39)
          Length = 216

 Score =  102 bits (253), Expect = 4e-21
 Identities = 53/93 (56%), Positives = 63/93 (67%)
 Frame = +2

Query: 74  VPNLPVDVDSWGRSACYP*SNFYPLSDGPSTRHRRITKADFRLCSTGESCSQAPFCLCTR 253
           +PN  VD++SW RSACYP S FYPLSDG ST HRRITK DFRLCST +SCSQ    L   
Sbjct: 1   MPNRHVDMNSWWRSACYPRSTFYPLSDGDSTFHRRITKPDFRLCSTCKSCSQPILYLYAL 60

Query: 254 GPMSVWPEETFARLRYLLGGLRPIETVYLRLSL 352
             ++   E +F  LRY LGG RP +T  L +S+
Sbjct: 61  LVIANHDEISFGLLRYFLGGYRPSKTARLAMSI 93



>gi|11282893|pir||F81737   hypothetical protein TC0129 [imported] - Chlamydia muridarum
           (strain Nigg)
          Length = 216

 Score =  100 bits (249), Expect = 1e-20
 Identities = 53/93 (56%), Positives = 62/93 (66%)
 Frame = +2

Query: 74  VPNLPVDVDSWGRSACYP*SNFYPLSDGPSTRHRRITKADFRLCSTGESCSQAPFCLCTR 253
           +PN  VD++SW RSACYP S FYPLSDG ST HRRITK DFRLCST  SCSQ    L   
Sbjct: 1   MPNRHVDMNSWWRSACYPRSTFYPLSDGDSTFHRRITKPDFRLCSTCWSCSQPILYLYAL 60

Query: 254 GPMSVWPEETFARLRYLLGGLRPIETVYLRLSL 352
             ++   E +F  LRY LGG RP +T  L +S+
Sbjct: 61  LVIANHDEISFGLLRYFLGGYRPSKTARLAMSI 93



>gi|19920142|gb|AAM08574.1|AC092750_8   Hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|20087087|gb|AAM10760.1|AC112514_13   Hypothetical protein [Oryza sativa]
          Length = 285

 Score = 72.4 bits (176), Expect = 3e-12
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = +2

Query: 263 SVWPEETFARLRYLLGGLRPIETVYLRLSLGPRV 364
           SVWPEETFARLRYLLGGLRPIETVYLRLSLGPRV
Sbjct: 173 SVWPEETFARLRYLLGGLRPIETVYLRLSLGPRV 206



>gi|11282814|pir||G81737   hypothetical protein TC0130 [imported] - Chlamydia muridarum
           (strain Nigg)
          Length = 122

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 32/61 (52%), Positives = 35/61 (57%)
 Frame = +1

Query: 1   TALMGEQPNPWNHLQLQVAKSRHRGAKPSRRCGXXXXXXXXXXXXXXXVERRPFHSAPSD 180
           TAL+GEQPNPW+ LQ Q A SRHRGAKP RR                 V+RR FH  P D
Sbjct: 62  TALIGEQPNPWDLLQPQDAMSRHRGAKPPRRYELLVAISLLSPEYLLSVKRRRFHFPPPD 121

Query: 181 H 183
           H
Sbjct: 122 H 122



>gi|15834739|ref|NP_296498.1|   hypothetical protein [Chlamydia muridarum]
 gi|11282815|pir||F81738   hypothetical protein TC0114 [imported] - Chlamydia muridarum
           (strain Nigg)
 gi|7190150|gb|AAF38993.1|   hypothetical protein [Chlamydia muridarum]
          Length = 122

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 31/61 (50%), Positives = 34/61 (55%)
 Frame = +1

Query: 1   TALMGEQPNPWNHLQLQVAKSRHRGAKPSRRCGXXXXXXXXXXXXXXXVERRPFHSAPSD 180
           TAL+GEQPNPW+ LQ Q A SRHRGAKP RR                 V+RR FH    D
Sbjct: 62  TALIGEQPNPWDLLQPQDAMSRHRGAKPPRRYELLVAISLLSPEYLLSVKRRRFHFPRPD 121

Query: 181 H 183
           H
Sbjct: 122 H 122



>gi|22296323|dbj|BAC10094.1|   alcohol dehydrogenase-like protein~contains ESTs
           D41510(S4048),AU033144(S4048) [Oryza sativa (japonica
           cultivar-group)]
 gi|24414200|dbj|BAC22442.1|   alcohol dehydrogenase-like protein~contains ESTs
           D41510(S4048),AU033144(S4048) [Oryza sativa (japonica
           cultivar-group)]
          Length = 302

 Score = 54.3 bits (129), Expect = 9e-07
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHKGDDNRMN 485
           VNGHNLVVDGGFTTHKGDDNRMN
Sbjct: 280 VNGHNLVVDGGFTTHKGDDNRMN 302



>gi|22296322|dbj|BAC10093.1|   alcohol dehydrogenase-like protein [Oryza sativa (japonica
           cultivar-group)]
 gi|24414199|dbj|BAC22441.1|   alcohol dehydrogenase-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 321

 Score = 47.0 bits (110), Expect = 1e-04
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHKGDDNRMN 485
           VNGHNLVVDGGFT+HKG D R+N
Sbjct: 299 VNGHNLVVDGGFTSHKGSDTRLN 321



>gi|7484267|pir||S59084   hypothetical protein 29.1 - red alga (Chondrus crispus)
           mitochondrion
 gi|1334480|emb|CAA87600.1|   unique orf [Chondrus crispus]
          Length = 79

 Score = 45.4 bits (106), Expect = 4e-04
 Identities = 26/54 (48%), Positives = 32/54 (59%)
 Frame = -3

Query: 229 LTARLTRRAETKVGLSDPTVPSGRAVAQRIKVTLGITG*SSPRVHIDGKVWHLD 68
           LT RL  +  T+V  +DP    G  + Q+IK TLGIT  S  RV ID  VW+LD
Sbjct: 8   LTIRLINQIGTQVSHNDPIFKCGINIVQQIKGTLGITDSSWLRVRIDVTVWYLD 61



>gi|13359451|dbj|BAB33421.1|   putative senescence-associated protein [Pisum sativum]
          Length = 282

 Score = 37.7 bits (86), Expect = 0.085
 Identities = 23/60 (38%), Positives = 31/60 (51%)
 Frame = +2

Query: 2   PH*WANSPTLGTTYSSRWRRADIEVPNLPVDVDSWGRSACYP*SNFYPLSDGPSTRHRRI 181
           P+ W N+PTLG    +   RADIE     V +++W   A YP  NF   SD  S + R +
Sbjct: 75  PYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQASYPCGNF---SDTSSFKFRSL 131



>gi|22296324|dbj|BAC10095.1|   short chain alcohol dehydrogenase-like protein [Oryza sativa
           (japonica cultivar-group)]
 gi|24414201|dbj|BAC22443.1|   short chain alcohol dehydrogenase-like protein [Oryza sativa
           (japonica cultivar-group)]
          Length = 287

 Score = 37.4 bits (85), Expect = 0.11
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHKGDD 497
           V GHNLVVDGG+T HKG D
Sbjct: 264 VTGHNLVVDGGYTVHKGAD 282



>gi|22296325|dbj|BAC10096.1|   short chain alcohol dehydrogenase-like protein [Oryza sativa
           (japonica cultivar-group)]
 gi|24414202|dbj|BAC22444.1|   short chain alcohol dehydrogenase-like protein [Oryza sativa
           (japonica cultivar-group)]
          Length = 429

 Score = 35.8 bits (81), Expect = 0.32
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHKG 503
           VNGHNLVVD G+T HKG
Sbjct: 412 VNGHNLVVDAGYTVHKG 428



>gi|21618306|gb|AAM67356.1|   unknown [Arabidopsis thaliana]
          Length = 167

 Score = 34.7 bits (78), Expect = 0.72
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHK 506
           VNGHNLVVDGGFTT K
Sbjct: 141 VNGHNLVVDGGFTTVK 156



>gi|25283123|pir||H85039   probable alcohol dehydrogenase [imported] - Arabidopsis thaliana
 gi|4262142|gb|AAD14442.1|   putative alcohol dehydrogenase [Arabidopsis thaliana]
 gi|7270184|emb|CAB77799.1|   putative alcohol dehydrogenase [Arabidopsis thaliana]
          Length = 283

 Score = 34.7 bits (78), Expect = 0.72
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHK 506
           VNGHNLVVDGGFTT K
Sbjct: 257 VNGHNLVVDGGFTTVK 272



>gi|18412155|ref|NP_567251.1|   putative alcohol dehydrogenase; protein id: At4g03140.1
           [Arabidopsis thaliana]
          Length = 279

 Score = 34.7 bits (78), Expect = 0.72
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHK 506
           VNGHNLVVDGGFTT K
Sbjct: 253 VNGHNLVVDGGFTTVK 268



>gi|22296331|dbj|BAC10102.1|   alcohol dehydrogenase-like protein [Oryza sativa (japonica
           cultivar-group)]
 gi|24414208|dbj|BAC22450.1|   alcohol dehydrogenase-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 288

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHK 506
           +NGHNLVVDGGFT  K
Sbjct: 266 INGHNLVVDGGFTVGK 281



>gi|15921442|ref|NP_377111.1|   104aa long hypothetical protein [Sulfolobus tokodaii]
 gi|15622228|dbj|BAB66220.1|   104aa long hypothetical protein [Sulfolobus tokodaii]
          Length = 104

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 16/27 (59%), Positives = 17/27 (62%)
 Frame = +2

Query: 59  RADIEVPNLPVDVDSWGRSACYP*SNF 139
           RADI+V N  VDV S  R  CYP  NF
Sbjct: 3   RADIDVANRGVDVSSRPRRPCYPRGNF 29



>gi|15921441|ref|NP_377110.1|   62aa long conserved hypothetical protein [Sulfolobus tokodaii]
 gi|15622227|dbj|BAB66219.1|   62aa long conserved hypothetical protein [Sulfolobus tokodaii]
          Length = 62

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 20/45 (44%), Positives = 22/45 (48%)
 Frame = -3

Query: 139 KVTLGITG*SSPRVHIDGKVWHLDXXXXXXXXXXXXXGWAVRPLM 5
           KVT GITG S  R HID  V ++D             G A RPLM
Sbjct: 12  KVTPGITGSSRARAHIDPAVCYIDVGSSHPGGAAAPKGRAARPLM 56



>gi|17544995|ref|NP_518397.1|   PROBABLE ACETYL-COA ACETYLTRANSFERASE (ACETOACETYL-COA THIOLASE)
           PROTEIN [Ralstonia solanacearum]
 gi|17427285|emb|CAD13804.1|   PROBABLE ACETYL-COA ACETYLTRANSFERASE (ACETOACETYL-COA THIOLASE)
           PROTEIN [Ralstonia solanacearum]
          Length = 393

 Score = 32.3 bits (72), Expect = 3.6
 Identities = 17/36 (47%), Positives = 18/36 (50%)
 Frame = -2

Query: 401 PGQVELGF*PCVRPAGQGTVSGRQFLWGVGLPKGNG 294
           P Q+E     CV PAGQG    RQ   G GLP   G
Sbjct: 46  PEQIEEVIMGCVLPAGQGQAPARQAALGAGLPLSVG 81



>gi|22296320|dbj|BAC10091.1|   similar to alcohol dehydrogenase [Oryza sativa (japonica
           cultivar-group)]
 gi|24414197|dbj|BAC22439.1|   similar to alcohol dehydrogenase [Oryza sativa (japonica
           cultivar-group)]
          Length = 309

 Score = 32.0 bits (71), Expect = 4.7
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHK 506
           VNGHNLVVDGG+T  K
Sbjct: 285 VNGHNLVVDGGYTVGK 300



>gi|22296321|dbj|BAC10092.1|   alcohol dehydrogenase-like protein [Oryza sativa (japonica
           cultivar-group)]
 gi|24414198|dbj|BAC22440.1|   alcohol dehydrogenase-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 296

 Score = 32.0 bits (71), Expect = 4.7
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHK 506
           VNGHNLVVDGG+T  K
Sbjct: 271 VNGHNLVVDGGYTVGK 286



>gi|21241463|ref|NP_641045.1|   conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21106804|gb|AAM35581.1|   conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 506

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 292 PPLPFGRPTPHRNCLPETVPWPAGLTQG*NPSSTCPGGRSNL 417
           PP P   PTP     P   P P+G      P++ CP G SN+
Sbjct: 55  PPAPAPTPTPAPTPAPTPAPAPSG------PAADCPSGFSNV 90



>gi|22296335|dbj|BAC10106.1|   alcohol dehydrogenase-like protein~contains EST C72060(E0889)
           [Oryza sativa (japonica cultivar-group)]
          Length = 462

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHKGDD 497
           + GHNLVVDGGFT  K  D
Sbjct: 282 ITGHNLVVDGGFTVGKEKD 300



>gi|23602121|ref|XP_147832.2|   similar to hypothetical protein MGC23138 [Homo sapiens] [Mus
           musculus]
          Length = 189

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = +1

Query: 292 PPLPFGRPTPHRNCLPETVPWPAGLTQG*NPSSTCPGGRSNLPL 423
           PP PF  P P  +C P  VP+PA    G  P  T P    N+P+
Sbjct: 85  PPGPF--PPPGPSCPPPGVPYPAPAVPG--PGPTGPYATPNMPM 124



>gi|19773874|gb|AAL98918.1|   IkBL [Rattus norvegicus]
          Length = 106

 Score = 31.6 bits (70), Expect = 6.1
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +1

Query: 211 G*VLQSSSLLPLHSRTNVRLARGNLCTPPLPFGRPTPHRNCLPETVPWPAGLTQG*NPSS 390
           G ++++ +LL  H   +V   +  L T P+P   P P   C     P P G   G   + 
Sbjct: 41  GRLVRAQALLQRHPGLDVDAGQPRLSTGPVPATMPLPCACCASWRRPCPPGPPWGHGAAC 100

Query: 391 TCPGG 405
            CP G
Sbjct: 101 CCPPG 105



>gi|22296332|dbj|BAC10103.1|   alcohol dehydrogenase-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 341

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTTHKGDDNRMN**HA 473
           + GHNLVVDGGFT  K    R+N  HA
Sbjct: 319 ITGHNLVVDGGFTVGK----RLNFAHA 341



>gi|22985250|gb|ZP_00030374.1|   hypothetical protein [Burkholderia fungorum]
          Length = 547

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 20/45 (44%), Positives = 21/45 (46%)
 Frame = -2

Query: 416 RFERPPGQVELGF*PCVRPAGQGTVSGRQFLWGVGLPKGNGGVQR 282
           R   P G    GF    RP G G   GR+F  G G P GNGG  R
Sbjct: 456 RKSAPSGNGRPGFGGRGRPGG-GNGGGRRFGSGSGKPAGNGGAAR 499



>gi|15230558|ref|NP_190736.1|   short-chain alcohol dehydrogenase-like protein; protein id:
           At3g51680.1 [Arabidopsis thaliana]
 gi|11250813|pir||T46064   short-chain alcohol dehydrogenase-like protein - Arabidopsis
           thaliana
 gi|6580150|emb|CAB63154.1|   short-chain alcohol dehydrogenase-like protein [Arabidopsis
           thaliana]
          Length = 303

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = -3

Query: 553 VNGHNLVVDGGFTT 512
           VNGHNLVVDGG TT
Sbjct: 283 VNGHNLVVDGGVTT 296



>gi|18138077|emb|CAD20601.2|   putative ES protein [Ostertagia ostertagi]
          Length = 176

 Score = 31.2 bits (69), Expect = 8.0
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = +3

Query: 165 LGTVG---SLRPTFVSARRVSLAVKLPSAFALEDQCPSGPRKPL-HASVTFWEAYAP*KL 332
           LG VG   S  PT    R+     K P A  L+D+ P  PR+P+ H +  +  A+   KL
Sbjct: 81  LGMVGWTPSSEPTEAPERKPVATFKTPVAVVLDDEVPPSPREPVPHRTAGYGLAHQKRKL 140

Query: 333 ST*D 344
              D
Sbjct: 141 QIPD 144






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Dec 9, 2002  8:40 PM
  Number of letters in database: 397,579,747
  Number of sequences in database:  1,247,039
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 397,333,461
Number of Sequences: 1247039
Number of extensions: 8646583
Number of successful extensions: 21675
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 20755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21656
length of database: 397,579,747
effective HSP length: 115
effective length of database: 254,170,262
effective search space used: 17537748078
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)