Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1039752565-029916-15641 Query= (470 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,247,039 sequences; 397,579,747 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
RID: 1039752565-029916-15641
Query= (470 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,247,039 sequences; 397,579,747 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Score E Sequences producing significant alignments: (bits) Value gi|13518384|ref|NP_084743.1| hypothetical protein [Oenother... 78 2e-22 gi|10039641|gb|AAG12204.1|AF287482_5 Orf122 [Chlorobium tep... 105 3e-22 gi|5531888|gb|AAD44515.1| unknown [Brugia malayi] 54 1e-06 gi|321193|pir||A44803 pG1 protein - human (fragment) 52 3e-06 gi|7518530|pir||G71244 hypothetical protein PH0217 - Pyroco... 51 5e-06 gi|24113929|ref|NP_708439.1| orf, partial conserved hypothe... 38 1e-05 gi|25027441|ref|NP_737495.1| hypothetical protein [Coryneba... 35 0.47 gi|25028097|ref|NP_738151.1| hypothetical protein [Coryneba... 35 0.47 gi|20129307|ref|NP_609113.1| CG5171 gene product [Drosophil... 34 0.61 gi|14601722|ref|NP_148263.1| hypothetical protein [Aeropyru... 33 1.0 gi|21464730|gb|AAM54490.1| zinc-finger/leucine-zipper co-tr... 32 2.3 gi|23011807|gb|ZP_00052059.1| hypothetical protein [Magneto... 32 2.3 gi|22900830|gb|AAL86014.1| co-activator/regulatory zinc-fin... 32 2.3 gi|16127006|ref|NP_421570.1| hypothetical protein [Caulobac... 32 2.3 gi|547657|sp|Q05502|HMPH_CHICK HOMEOBOX PROTEIN PRH >gi|744... 32 3.9 gi|4557799|ref|NP_000426.1| Notch homolog 3 [Homo sapiens] ... 31 5.2 gi|11140817|ref|NP_068557.1| retinoic acid induced 2 [Homo ... 31 5.2 gi|20379790|gb|AAH27937.1| retinoic acid induced 2 [Homo sa... 31 5.2 gi|21222973|ref|NP_628752.1| hypothetical protein [Streptom... 31 5.2 gi|24323752|ref|NP_715116.1| hypothetical protein predicted... 31 5.2 gi|3043566|dbj|BAA25447.1| KIAA0521 protein [Homo sapiens] 31 6.7 gi|14670377|ref|NP_056133.1| Rho-specific guanine nucleotid... 31 6.7 gi|1928964|gb|AAB82337.1| Mus musculus AblSH3 binding prote... 31 6.7 gi|11095327|gb|AAG29834.1|AF308446_1 unknown [Paracoccus pa... 31 6.7 gi|21219450|ref|NP_625229.1| putative secreted proline-rich... 31 6.7 gi|7959153|dbj|BAA95971.1| KIAA1447 protein [Homo sapiens] 31 6.7 gi|22988658|gb|ZP_00033720.1| hypothetical protein [Burkhol... 31 6.7 gi|6760079|gb|AAF28187.1|AF162781_1 SH2-containing inositol... 31 6.7 gi|9664585|gb|AAF97188.1|AF268611_11 membrane-associated su... 31 6.7 gi|82584|pir||C22364 alpha/beta-gliadin precursor (clone A2... 30 8.8 gi|22996438|gb|ZP_00040694.1| hypothetical protein [Xylella... 30 8.8 gi|15806611|ref|NP_295326.1| hypothetical protein [Deinococ... 30 8.8 gi|12620615|gb|AAG60891.1|AF322013_10 ID457 [Bradyrhizobium... 30 8.8 gi|6677997|ref|NP_033223.1| solute carrier family 16 (monoc... 30 8.8 gi|82587|pir||D22364 alpha/beta-gliadin precursor (clone A7... 30 8.8 Alignments
Score E Sequences producing significant alignments: (bits) Value gi|13518384|ref|NP_084743.1| hypothetical protein [Oenother... 78 2e-22 gi|10039641|gb|AAG12204.1|AF287482_5 Orf122 [Chlorobium tep... 105 3e-22 gi|5531888|gb|AAD44515.1| unknown [Brugia malayi] 54 1e-06 gi|321193|pir||A44803 pG1 protein - human (fragment) 52 3e-06 gi|7518530|pir||G71244 hypothetical protein PH0217 - Pyroco... 51 5e-06 gi|24113929|ref|NP_708439.1| orf, partial conserved hypothe... 38 1e-05 gi|25027441|ref|NP_737495.1| hypothetical protein [Coryneba... 35 0.47 gi|25028097|ref|NP_738151.1| hypothetical protein [Coryneba... 35 0.47 gi|20129307|ref|NP_609113.1| CG5171 gene product [Drosophil... 34 0.61 gi|14601722|ref|NP_148263.1| hypothetical protein [Aeropyru... 33 1.0 gi|21464730|gb|AAM54490.1| zinc-finger/leucine-zipper co-tr... 32 2.3 gi|23011807|gb|ZP_00052059.1| hypothetical protein [Magneto... 32 2.3 gi|22900830|gb|AAL86014.1| co-activator/regulatory zinc-fin... 32 2.3 gi|16127006|ref|NP_421570.1| hypothetical protein [Caulobac... 32 2.3 gi|547657|sp|Q05502|HMPH_CHICK HOMEOBOX PROTEIN PRH >gi|744... 32 3.9 gi|4557799|ref|NP_000426.1| Notch homolog 3 [Homo sapiens] ... 31 5.2 gi|11140817|ref|NP_068557.1| retinoic acid induced 2 [Homo ... 31 5.2 gi|20379790|gb|AAH27937.1| retinoic acid induced 2 [Homo sa... 31 5.2 gi|21222973|ref|NP_628752.1| hypothetical protein [Streptom... 31 5.2 gi|24323752|ref|NP_715116.1| hypothetical protein predicted... 31 5.2 gi|3043566|dbj|BAA25447.1| KIAA0521 protein [Homo sapiens] 31 6.7 gi|14670377|ref|NP_056133.1| Rho-specific guanine nucleotid... 31 6.7 gi|1928964|gb|AAB82337.1| Mus musculus AblSH3 binding prote... 31 6.7 gi|11095327|gb|AAG29834.1|AF308446_1 unknown [Paracoccus pa... 31 6.7 gi|21219450|ref|NP_625229.1| putative secreted proline-rich... 31 6.7 gi|7959153|dbj|BAA95971.1| KIAA1447 protein [Homo sapiens] 31 6.7 gi|22988658|gb|ZP_00033720.1| hypothetical protein [Burkhol... 31 6.7 gi|6760079|gb|AAF28187.1|AF162781_1 SH2-containing inositol... 31 6.7 gi|9664585|gb|AAF97188.1|AF268611_11 membrane-associated su... 31 6.7 gi|82584|pir||C22364 alpha/beta-gliadin precursor (clone A2... 30 8.8 gi|22996438|gb|ZP_00040694.1| hypothetical protein [Xylella... 30 8.8 gi|15806611|ref|NP_295326.1| hypothetical protein [Deinococ... 30 8.8 gi|12620615|gb|AAG60891.1|AF322013_10 ID457 [Bradyrhizobium... 30 8.8 gi|6677997|ref|NP_033223.1| solute carrier family 16 (monoc... 30 8.8 gi|82587|pir||D22364 alpha/beta-gliadin precursor (clone A7... 30 8.8
>gi|13518384|ref|NP_084743.1| hypothetical protein [Oenothera elata subsp. hookeri] gi|13518406|ref|NP_084765.1| hypothetical protein [Oenothera elata subsp. hookeri] gi|6723800|emb|CAB67211.1| hypothetical protein [Oenothera elata subsp. hookeri] gi|6723823|emb|CAB67234.1| hypothetical protein [Oenothera elata subsp. hookeri] Length = 59 Score = 77.8 bits (190), Expect(2) = 2e-22 Identities = 36/36 (100%), Positives = 36/36 (100%) Frame = +1 Query: 232 MISSWSERMISHTGTETRPRLLREAAVGNFPQWAKA 339 MISSWSERMISHTGTETRPRLLREAAVGNFPQWAKA Sbjct: 1 MISSWSERMISHTGTETRPRLLREAAVGNFPQWAKA 36
Score = 48.5 bits (114), Expect(2) = 2e-22 Identities = 23/32 (71%), Positives = 24/32 (75%) Frame = +2 Query: 314 GIFRSGRKPDGAMPRGGGRPTGRQLLFSEKKQ 409 G F K DGAMPRGG RPTGR+LLF EKKQ Sbjct: 28 GNFPQWAKADGAMPRGGRRPTGRELLFPEKKQ 59
>gi|10039641|gb|AAG12204.1|AF287482_5 Orf122 [Chlorobium tepidum] Length = 121 Score = 105 bits (261), Expect = 3e-22 Identities = 62/104 (59%), Positives = 69/104 (66%), Gaps = 5/104 (4%) Frame = -1 Query: 467 CLTAAAGTELADAYSSDTVIV-----SSPRKEVDDPWAFHLHAALLRQAFAHCGKFPTAA 303 C+TAAAGTELA AYS TV SSP K P F +HAALLRQAFAHC F TAA Sbjct: 18 CITAAAGTELAVAYSQGTVTAGKPTSSSPAKGFYIPKNFIIHAALLRQAFAHCAIFLTAA 77 Query: 302 SRRSLGRVSVPVWLIILSDQLLIIALVSYCLTN*LIRREPLLGR 171 SRRSL RVSVP+WLIILSDQL ++ LV TN L+ + R Sbjct: 78 SRRSLDRVSVPMWLIILSDQLSVVGLVGRYPTNYLMEHRLIFWR 121
>gi|5531888|gb|AAD44515.1| unknown [Brugia malayi] Length = 73 Score = 53.5 bits (127), Expect = 1e-06 Identities = 25/30 (83%), Positives = 25/30 (83%) Frame = +2 Query: 224 PRR*SVAGPRG*SATLGLRHGPDSYGRQQW 313 PRR VAG RG ATLGLRHGPDSYGRQQW Sbjct: 27 PRRRRVAGLRGRPATLGLRHGPDSYGRQQW 56
>gi|321193|pir||A44803 pG1 protein - human (fragment) Length = 75 Score = 52.0 bits (123), Expect = 3e-06 Identities = 25/35 (71%), Positives = 27/35 (77%) Frame = -3 Query: 300 P*ESGPCLSPSVADHPLGPATDHRLGKLLPHQLAN 196 P ESGP LSPSVA PLGPA HRLG+ LP+QL N Sbjct: 35 PVESGPYLSPSVAVQPLGPAKHHRLGRPLPYQLTN 69
>gi|7518530|pir||G71244 hypothetical protein PH0217 - Pyrococcus horikoshii gi|3256603|dbj|BAA29286.1| 106aa long hypothetical protein [Pyrococcus horikoshii] Length = 106 Score = 51.2 bits (121), Expect = 5e-06 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 2/83 (2%) Frame = -1 Query: 344 RQAFAHCGKFPTAASRRSLGRVSVPVWLIILSDQLLIIALVSYCLTN*LIRREPLLGR-- 171 R+ F HCG F AA RR+ RVSV + + LS + I LV TN LI R P+LGR Sbjct: 11 RRGFPHCGGFAPAAPRRAWTRVSVSISGLPLSRPVPIFGLVGRYPTNYLIGRRPILGRSL 70 Query: 170 ISPFAPQPTGY*QPFPVVVPLPR 102 +PF P Q + + P+ R Sbjct: 71 TAPFRPGDLPVPQAYGGLAPVSR 93
>gi|24113929|ref|NP_708439.1| orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|24053033|gb|AAN44146.1|AE015280_4 orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301] Length = 134 Score = 38.1 bits (87), Expect(2) = 1e-05 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = -3 Query: 222 KLLP--HQLANQTRAPPWADFSFCSSAYGVLATVSSCCSPPKGRFLRVTHPFATGNTTSR 49 KL+P H + R P S Y VLATVSS PP G F +THP AT +S+ Sbjct: 23 KLIPSGHIRWQEARRSP----SLVLRRYAVLATVSSSYPPPSGSFPDITHPSATRQRSSK 78
Score = 34.3 bits (77), Expect = 0.61 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 18/61 (29%) Frame = -1 Query: 269 VWLIILSDQLLIIALVSYCLTN*LI------------------RREPLLGRISPFAPQPT 144 +WL+ILSDQL I+ALVS TN LI RR +L +S P P+ Sbjct: 1 MWLVILSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRRYAVLATVSSSYPPPS 60 Query: 143 G 141 G Sbjct: 61 G 61
Score = 31.6 bits (70), Expect(2) = 1e-05 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = -2 Query: 52 PFDLHVLSMPPAFILS 5 PFDLHVL +PPAF LS Sbjct: 83 PFDLHVLGLPPAFNLS 98
>gi|25027441|ref|NP_737495.1| hypothetical protein [Corynebacterium efficiens YS-314] gi|23492723|dbj|BAC17695.1| hypothetical protein [Corynebacterium efficiens YS-314] Length = 122 Score = 34.7 bits (78), Expect = 0.47 Identities = 18/28 (64%), Positives = 19/28 (67%) Frame = +1 Query: 4 GSG*TLAACLTHASRTGSGVSSGERVSN 87 GSG TLAACLTHASRT G V+N Sbjct: 94 GSGRTLAACLTHASRTMKPCLQGGLVAN 121
>gi|25028097|ref|NP_738151.1| hypothetical protein [Corynebacterium efficiens YS-314] gi|23493381|dbj|BAC18351.1| hypothetical protein [Corynebacterium efficiens YS-314] Length = 108 Score = 34.7 bits (78), Expect = 0.47 Identities = 18/28 (64%), Positives = 19/28 (67%) Frame = +1 Query: 4 GSG*TLAACLTHASRTGSGVSSGERVSN 87 GSG TLAACLTHASRT G V+N Sbjct: 80 GSGRTLAACLTHASRTMKPCLQGGLVAN 107
>gi|20129307|ref|NP_609113.1| CG5171 gene product [Drosophila melanogaster] gi|24582490|ref|NP_723273.1| CG5171-PB [Drosophila melanogaster] gi|7297245|gb|AAF52509.1| CG5171-PA [Drosophila melanogaster] gi|21430192|gb|AAM50774.1| LD21828p [Drosophila melanogaster] gi|22945862|gb|AAN10629.1|AE003617_11 CG5171-PB [Drosophila melanogaster] Length = 273 Score = 34.3 bits (77), Expect = 0.61 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = -1 Query: 185 PLLGRISPFAPQPTGY*-QPFPVVVPLPRAGSYALLTRSPLETPLPVRLACVKHAASVHP 9 P++ + FA GY PV V L G+ A + +P +T +PV L + H + HP Sbjct: 8 PVISNLEDFANNLPGYLISESPVAVLLDYDGTLAPIADNPAKTKMPVELEAILHKIAKHP 67 Query: 8 E 6 + Sbjct: 68 K 68
>gi|14601722|ref|NP_148263.1| hypothetical protein [Aeropyrum pernix] gi|7517339|pir||E72581 hypothetical protein APES065 - Aeropyrum pernix (strain K1) gi|5105625|dbj|BAA80938.1| 92aa long hypothetical protein [Aeropyrum pernix] Length = 92 Score = 33.5 bits (75), Expect = 1.0 Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 3/69 (4%) Frame = +2 Query: 176 QGGARV*LASW*GNSLPRR*SVAGPRG*SATLGLRHGPDSYGRQQWGIFRSGRKPDGAMP 355 + GA SW GN P V R + LR GP YG Q R+ DGA P Sbjct: 21 EDGAAAHHGSWRGNGPPSLRRVGAVRAGAPRWALRQGPRPYGAHQARKLRNAGNRDGATP 80 Query: 356 R---GGGRP 373 GG P Sbjct: 81 SAPLGGAFP 89
>gi|21464730|gb|AAM54490.1| zinc-finger/leucine-zipper co-transducer NIF-1 [Rattus norvegicus] Length = 572 Score = 32.3 bits (72), Expect = 2.3 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 9/65 (13%) Frame = -3 Query: 375 VGLPPPRGIAPSGFRPLRKIPHCCLP*ESGP-CLSPSVADHPLG--------PATDHRLG 223 + P P +AP PL + C P GP LSP+ H G PAT H LG Sbjct: 181 ISFPSPDTLAPGTKWPLLQ---CGGPPRDGPEVLSPTKTHHTGGSQGSSTPPPATSHALG 237 Query: 222 KLLPH 208 L+PH Sbjct: 238 LLVPH 242
>gi|23011807|gb|ZP_00052059.1| hypothetical protein [Magnetospirillum magnetotacticum] Length = 602 Score = 32.3 bits (72), Expect = 2.3 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = -3 Query: 378 PVGLPPPRGIAPSGFR-PLRKIPHCCLP*ESGPCLSP 271 P+ PP RG +P GFR PL +PH +P +S P P Sbjct: 26 PISXPPXRGDSPMGFRLPLASLPH--VPPDSYPYYHP 60
>gi|22900830|gb|AAL86014.1| co-activator/regulatory zinc-finger protein NIF [Rattus norvegicus] Length = 822 Score = 32.3 bits (72), Expect = 2.3 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 9/65 (13%) Frame = -3 Query: 375 VGLPPPRGIAPSGFRPLRKIPHCCLP*ESGP-CLSPSVADHPLG--------PATDHRLG 223 + P P +AP PL + C P GP LSP+ H G PAT H LG Sbjct: 431 ISFPSPDTLAPGTKWPLLQ---CGGPPRDGPEVLSPTKTHHTGGSQGSSTPPPATSHALG 487 Query: 222 KLLPH 208 L+PH Sbjct: 488 LLVPH 492
>gi|16127006|ref|NP_421570.1| hypothetical protein [Caulobacter crescentus CB15] gi|25399825|pir||F87592 hypothetical protein CC2774 [imported] - Caulobacter crescentus gi|13424372|gb|AAK24738.1| hypothetical protein [Caulobacter crescentus CB15] Length = 514 Score = 32.3 bits (72), Expect = 2.3 Identities = 24/52 (46%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Frame = +2 Query: 236 SVAGPRG*SATLGLR-HGPDSYGRQQWGIFRSGRKP--DGAMPRGGGRPTGR 382 SVAGP + LG R D GR G+ R G P DGA P G G P GR Sbjct: 359 SVAGPHRLRSALGQRDRRSDCAGR---GLLRRGMGPASDGAAPGGAGGPGGR 407
>gi|547657|sp|Q05502|HMPH_CHICK HOMEOBOX PROTEIN PRH gi|7446286|pir||S78063 homeobox protein Prh - chicken gi|297087|emb|CAA45966.1| probox protein [Gallus gallus] Length = 277 Score = 31.6 bits (70), Expect = 3.9 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -1 Query: 188 EPLLGRISPFAPQPTGY*QPFPVVVPLPRAGSYALLT--RSPLETPLPVRLACVKHAASV 15 E +LGR AP P P P +P P + +L+ R+P+ P P+ A H A+ Sbjct: 38 EDILGRGPAAAPAPHSLPAPPPPTLPSPNSSFTSLVAPYRTPVYEPTPIHPAFSHHLAAT 97 Query: 14 H 12 + Sbjct: 98 Y 98
>gi|4557799|ref|NP_000426.1| Notch homolog 3 [Homo sapiens] gi|20139284|sp|Q9UM47|NTC3_HUMAN Neurogenic locus notch homolog protein 3 precursor (Notch 3) gi|7445892|pir||S78549 notch3 protein - human gi|2668592|gb|AAB91371.1| Notch3 [Homo sapiens] Length = 2321 Score = 31.2 bits (69), Expect = 5.2 Identities = 36/108 (33%), Positives = 41/108 (37%), Gaps = 2/108 (1%) Frame = -3 Query: 369 LPPPRGIAPSGFRPLRKIPHCCLP*ESGPCLSPSVADHPLGPATDHRLGKLLPHQLANQT 190 LPPP AP G P LP GP L L P T ++ Q Sbjct: 2175 LPPP---APPG-------PSFLLPLAPGPQL--------LNPGTP----------VSPQE 2206 Query: 189 RAPPWADFSFCSSAYGVLATVSSCCSPPKGRFLRV--THPFATGNTTS 52 R PP+ Y V SS PPK RFLRV HP+ T + S Sbjct: 2207 RPPPYLAVPGHGEEYPVAGAHSS---PPKARFLRVPSEHPYLTPSPES 2251
>gi|11140817|ref|NP_068557.1| retinoic acid induced 2 [Homo sapiens] gi|9087188|sp|Q9Y5P3|RAI2_HUMAN Retinoic acid-induced protein 2 gi|4928697|gb|AAD33688.1|AF136587_1 retinoic acid-induced protein [Homo sapiens] Length = 530 Score = 31.2 bits (69), Expect = 5.2 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = -1 Query: 188 EPLLGRISPFAPQPTGY*QPFPVVVPLPRAGSYALLTRSPLETPLPVRLACVKHAASVHP 9 +P +SP P P P+PV+VPLP P+ P+PV + +S P Sbjct: 215 QPFSSPLSPLVP-PATLLVPYPVIVPLP--------VPVPIPIPIPVPQSSESKFSSSFP 265 Query: 8 EP 3 +P Sbjct: 266 KP 267
>gi|20379790|gb|AAH27937.1| retinoic acid induced 2 [Homo sapiens] Length = 530 Score = 31.2 bits (69), Expect = 5.2 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = -1 Query: 188 EPLLGRISPFAPQPTGY*QPFPVVVPLPRAGSYALLTRSPLETPLPVRLACVKHAASVHP 9 +P +SP P P P+PV+VPLP P+ P+PV + +S P Sbjct: 215 QPFSSPLSPLVP-PATLLVPYPVIVPLP--------VPVPIPIPIPVPQSSESKFSSSFP 265 Query: 8 EP 3 +P Sbjct: 266 KP 267
>gi|21222973|ref|NP_628752.1| hypothetical protein [Streptomyces coelicolor A3(2)] gi|10129735|emb|CAC08291.1| hypothetical protein [Streptomyces coelicolor A3(2)] Length = 156 Score = 31.2 bits (69), Expect = 5.2 Identities = 15/50 (30%), Positives = 25/50 (50%) Frame = +2 Query: 290 DSYGRQQWGIFRSGRKPDGAMPRGGGRPTGRQLLFSEKKQ*RYLRNKHRL 439 +S+GR+ W + R PD G GR+LLF + + ++N+ L Sbjct: 59 ESHGRRAWRDLAAVRHPDDPFQEESGTGLGRRLLFQRVPEAKTVKNRVHL 108
>gi|24323752|ref|NP_715116.1| hypothetical protein predicted by GeneMark [Wigglesworthia brevipalpis] Length = 34 Score = 31.2 bits (69), Expect = 5.2 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = -3 Query: 267 VADHPLGPATDHRLGKLLPHQLAN 196 +A +PL PA D LG+ LPH LAN Sbjct: 1 MAGYPLRPARDRSLGEHLPHLLAN 24
>gi|3043566|dbj|BAA25447.1| KIAA0521 protein [Homo sapiens] Length = 1050 Score = 30.8 bits (68), Expect = 6.7 Identities = 30/88 (34%), Positives = 37/88 (42%), Gaps = 9/88 (10%) Frame = -1 Query: 254 LSDQLLIIALVSYCLTN*LIRRE--PLL-GRISPFAPQPTGY*QPFPVVVPLP------R 102 L QLL+ L+ + RR P+L GR SP P G+ P P P + Sbjct: 956 LKQQLLLNKLMGKDESTSRNRRSLSPILPGRHSPAPPPDPGFPAPSPPPADSPSEGFSLK 1015 Query: 101 AGSYALLTRSPLETPLPVRLACVKHAAS 18 AG ALL P +PLP K AS Sbjct: 1016 AGGTALLPGPPAPSPLPATPLSAKEDAS 1043
>gi|14670377|ref|NP_056133.1| Rho-specific guanine nucleotide exchange factor p114 [Homo sapiens] Length = 1015 Score = 30.8 bits (68), Expect = 6.7 Identities = 30/88 (34%), Positives = 37/88 (42%), Gaps = 9/88 (10%) Frame = -1 Query: 254 LSDQLLIIALVSYCLTN*LIRRE--PLL-GRISPFAPQPTGY*QPFPVVVPLP------R 102 L QLL+ L+ + RR P+L GR SP P G+ P P P + Sbjct: 921 LKQQLLLNKLMGKDESTSRNRRSLSPILPGRHSPAPPPDPGFPAPSPPPADSPSEGFSLK 980 Query: 101 AGSYALLTRSPLETPLPVRLACVKHAAS 18 AG ALL P +PLP K AS Sbjct: 981 AGGTALLPGPPAPSPLPATPLSAKEDAS 1008
>gi|1928964|gb|AAB82337.1| Mus musculus AblSH3 binding protein, incomplete sequence Length = 479 Score = 30.8 bits (68), Expect = 6.7 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = -3 Query: 375 VGLPPPRGIAPS-GFRPLRKIPHCCLP*ESGPCLSPSVADHPLGPATDHRLGKLLPHQLA 199 V PPP+ + + L +PH LP E PS+A PL PAT +++ +P Sbjct: 269 VAAPPPKNSFNNPAYYVLEGVPHQLLPLEP-----PSLARAPLPPATKNKVAITVPAPQL 323 Query: 198 NQTRAP 181 + R P Sbjct: 324 GRHRTP 329
>gi|11095327|gb|AAG29834.1|AF308446_1 unknown [Paracoccus pantotrophus] Length = 251 Score = 30.8 bits (68), Expect = 6.7 Identities = 25/70 (35%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Frame = -3 Query: 366 PPPRGIAPSGFRPLRKIPHCCLP*ESGPCL--SPSVADHPLGPATDHRLGKLLPHQLANQ 193 P PR PSG RP R P PC SPS PL P + +P A Sbjct: 187 PRPRNPKPSGQRPKR-------PLHPKPCRRPSPSPPPSPLPPRPRRTRSRRVPSAAA-- 237 Query: 192 TRAPPWADFS 163 PWAD S Sbjct: 238 --GGPWADLS 245
>gi|21219450|ref|NP_625229.1| putative secreted proline-rich protein [Streptomyces coelicolor A3(2)] gi|6580645|emb|CAB63180.1| putative secreted proline-rich protein [Streptomyces coelicolor A3(2)] Length = 203 Score = 30.8 bits (68), Expect = 6.7 Identities = 22/54 (40%), Positives = 24/54 (44%) Frame = -1 Query: 164 PFAPQPTGY*QPFPVVVPLPRAGSYALLTRSPLETPLPVRLACVKHAASVHPEP 3 P AP+P P P P PR T +P TP PVR A A SV P P Sbjct: 100 PPAPEPEPPPPPAPRPAP-PRPAPEPSPTPTPAPTPPPVRPAAPAPAPSVTPTP 152
>gi|7959153|dbj|BAA95971.1| KIAA1447 protein [Homo sapiens] Length = 1721 Score = 30.8 bits (68), Expect = 6.7 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = -3 Query: 393 KRS*RPVGLPPPRGIAPSGFRPLRKIPHCCLP*E-SGPCLSPSVADHPLGPAT 238 K + +PV L P APS K+P CC P + P SP+ P P T Sbjct: 221 KSTHKPVALTPTAPGAPSPAAGPTKLPPCCHPPDPKPPASSPTPPPRPSAPCT 273
>gi|22988658|gb|ZP_00033720.1| hypothetical protein [Burkholderia fungorum] Length = 327 Score = 30.8 bits (68), Expect = 6.7 Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -3 Query: 285 PCLSPSVADHPLGPATDHRLGKLLPHQLANQTR---APPWADFSFCSSAYGVLATVSSCC 115 P +S S+ PL PA + L LL H+ R A WA FS + A A VS C Sbjct: 251 PEVSSSLVSRPLSPAMN--LTTLLVHRRNRSLRPNAAAAWAQFSTPAGAISNAADVSPCA 308 Query: 114 S 112 S Sbjct: 309 S 309
>gi|6760079|gb|AAF28187.1|AF162781_1 SH2-containing inositol 5-phosphatase 2 [Mus musculus] Length = 1257 Score = 30.8 bits (68), Expect = 6.7 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = -3 Query: 375 VGLPPPRGIAPS-GFRPLRKIPHCCLP*ESGPCLSPSVADHPLGPATDHRLGKLLPHQLA 199 V PPP+ + + L +PH LP E PS+A PL PAT +++ +P Sbjct: 973 VAAPPPKNSFNNPAYYVLEGVPHQLLPLEP-----PSLARAPLPPATKNKVAITVPAPQL 1027 Query: 198 NQTRAP 181 + R P Sbjct: 1028 GRHRTP 1033
>gi|9664585|gb|AAF97188.1|AF268611_11 membrane-associated subtilysin-type serine protease [uncultured marine group II euryarchaeote 37F11] Length = 1135 Score = 30.8 bits (68), Expect = 6.7 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -3 Query: 378 PVGLPPPRGIAPSGFRPLRKIPHCCLP*ESGPCLSP 271 PVGLPP G+ P+G P + +P + +GP L P Sbjct: 1075 PVGLPPA-GLPPAGLPPAKSVPVLPVQVTAGPPLPP 1109
>gi|82584|pir||C22364 alpha/beta-gliadin precursor (clone A212) - wheat Length = 319 Score = 30.4 bits (67), Expect = 8.8 Identities = 17/53 (32%), Positives = 23/53 (43%) Frame = -1 Query: 200 LIRREPLLGRISPFAPQPTGY*QPFPVVVPLPRAGSYALLTRSPLETPLPVRL 42 L++ + G+ PF PQ QP+P P P Y L P P P +L Sbjct: 44 LVQEQQFQGQQQPFPPQ-----QPYPQPQPFPSQQPYLQLQPFPQPQPFPPQL 91
>gi|22996438|gb|ZP_00040694.1| hypothetical protein [Xylella fastidiosa Ann-1] Length = 344 Score = 30.4 bits (67), Expect = 8.8 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = -1 Query: 428 YSSDTVIVSSPRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSVPV 267 + +D ++ + EVD WAFHL + + +A P A R++ +V VP+ Sbjct: 33 FVTDNAVICDSKVEVDIDWAFHLLSVMNLNQYAMKSAQPVLAV-RTIEQVKVPL 85
>gi|15806611|ref|NP_295326.1| hypothetical protein [Deinococcus radiodurans] gi|7472963|pir||H75375 hypothetical protein - Deinococcus radiodurans (strain R1) gi|6459374|gb|AAF11169.1|AE002004_8 hypothetical protein [Deinococcus radiodurans] Length = 360 Score = 30.4 bits (67), Expect = 8.8 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +2 Query: 293 SYGRQQWGIFRSGRKPDGAMPRGGGRPTGRQLLFSE 400 SY R Q+ +R+ R P G + GGG+ T L SE Sbjct: 260 SYLRSQYDYYRAERAPGGVLGTGGGKATPAGLKTSE 295
>gi|12620615|gb|AAG60891.1|AF322013_10 ID457 [Bradyrhizobium japonicum] Length = 202 Score = 30.4 bits (67), Expect = 8.8 Identities = 30/82 (36%), Positives = 36/82 (43%), Gaps = 12/82 (14%) Frame = -3 Query: 390 RS*RP----VGLPPP-RGIAPSGFRPLRKIPHCCLP*ESGPCLSPSVADHPLG-PATD-- 235 RS RP G+PP +G A S RPL + PH + PC S P G PA+D Sbjct: 44 RSTRPRLKLTGVPPAEKGGAQSSNRPLARRPH-----DKNPCAERSAL--PAGRPASDSR 96 Query: 234 ----HRLGKLLPHQLANQTRAP 181 +R G P A RAP Sbjct: 97 PGCRYRCGSRCPGARATHERAP 118
>gi|6677997|ref|NP_033223.1| solute carrier family 16 (monocarboxylic acid transporters), member 2 [Mus musculus] gi|13431682|sp|O70324|MOT8_MOUSE Monocarboxylate transporter 8 (MCT 8) (X-linked PEST-containing transporter) gi|2944356|gb|AAC40078.1| X-linked PEST-containing transporter [Mus musculus] Length = 565 Score = 30.4 bits (67), Expect = 8.8 Identities = 19/56 (33%), Positives = 22/56 (39%) Frame = -1 Query: 170 ISPFAPQPTGY*QPFPVVVPLPRAGSYALLTRSPLETPLPVRLACVKHAASVHPEP 3 + P PQP QP P PLP G A PL P P+ + PEP Sbjct: 50 VPPPEPQPEPEPQPLPDPAPLPELGFEAEPEPQPLPDPAPLPELGFEAEPVQEPEP 105
>gi|82587|pir||D22364 alpha/beta-gliadin precursor (clone A735) - wheat Length = 326 Score = 30.4 bits (67), Expect = 8.8 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -1 Query: 200 LIRREPLLGRISPFAPQPTGY*QPFPVVVPLPRAGSYALLTRSPLETPLPVRL 42 L++++ G+ PF PQ QP+P P P Y L P P P +L Sbjct: 44 LVQQQQFPGQQQPFPPQ-----QPYPQQQPFPSQQPYMQLQPFPQPQPFPPQL 91
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Dec 9, 2002 8:40 PM Number of letters in database: 397,579,747 Number of sequences in database: 1,247,039 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 376,264,753 Number of Sequences: 1247039 Number of extensions: 8795117 Number of successful extensions: 27024 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 24004 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 26562 length of database: 397,579,747 effective HSP length: 112 effective length of database: 257,911,379 effective search space used: 11348100676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
