RID=1039753423-07037-21985,

RID=1039753423-07037-21985, BLASTX 2.2.5 [Nov-16-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
RID: 1039753423-07037-21985
Query= (570 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,247,039 sequences; 397,579,747 total letters
If you have any problems or questions with the results of this search
please refer to the BLAST FAQs
Taxonomy reports
Distribution of 19 Blast Hits on the Query Sequence



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22202762|dbj|BAC07418.1|  SOH1-like protein~contains ESTs...   130   1e-29 
gi|23617099|dbj|BAC20782.1|  SOH1-like protein~contains ESTs...   129   3e-29 
gi|12597881|gb|AAG60189.1|AC084763_9  hypothetical protein [...   125   3e-28 
gi|22326900|ref|NP_197491.2|  SOH1 - like protein; protein i...    98   6e-20 
gi|12597880|gb|AAG60188.1|AC084763_8  hypothetical protein [...    70   2e-11 
gi|21912572|emb|CAD21541.1|  hypothetical protein [Taenia so...    43   0.003 
gi|7705592|ref|NP_057144.1|  CGI-125 protein [Homo sapiens] ...    42   0.006 
gi|12838342|dbj|BAB24169.1|  data source:SPTR, source key:Q9...    41   0.008 
gi|13385570|ref|NP_080344.1|  RIKEN cDNA 3110004H13 [Mus mus...    41   0.008 
gi|21355471|ref|NP_649483.1|  CG1057-PA [Drosophila melanoga...    38   0.091 
gi|17507087|ref|NP_492413.1|  Yeast SOH1 protein like [Caeno...    38   0.091 
gi|25012209|gb|AAN71220.1|  GM28912p [Drosophila melanogaster]     37   0.12  
gi|21291658|gb|EAA03803.1|  agCP14777 [Anopheles gambiae str...    36   0.27  
gi|22095495|sp|Q55756|CARB_SYNY3  Carbamoyl-phosphate syntha...    34   1.3   
gi|16331605|ref|NP_442333.1|  carbamoyl-phosphate synthase, ...    34   1.3   
gi|22979438|gb|ZP_00025161.1|  hypothetical protein [Ralston...    32   3.8   
gi|7512029|pir||T13748  sex comb protein - fruit fly (Drosop...    32   6.5   
gi|24653657|ref|NP_725398.1|  CG8787-PA [Drosophila melanoga...    32   6.5   
gi|19075359|ref|NP_587859.1|  conserved hypothetical protein...    31   8.5   

Alignments


>gi|22202762|dbj|BAC07418.1|   SOH1-like protein~contains ESTs C73780(E20596),C99584(E20596)
           [Oryza sativa (japonica cultivar-group)]
          Length = 203

 Score =  130 bits (326), Expect = 1e-29
 Identities = 68/123 (55%), Positives = 68/123 (55%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHIXXXXXXXXXX 182
           I YPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHI          
Sbjct: 69  IMYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHILPRPPPEPTP 128

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFAGTPGTNIPKNDMR 362
                                                       QFAGTPGTNIPKNDMR
Sbjct: 129 TPAPAPAAVPPSASVPSTVVPPVAAPPSALLPMSAAGASAMSPMQFAGTPGTNIPKNDMR 188

Query: 363 NVM 371
           NVM
Sbjct: 189 NVM 191



>gi|23617099|dbj|BAC20782.1|   SOH1-like protein~contains ESTs C73780(E20596),C99584(E20596)
           [Oryza sativa (japonica cultivar-group)]
          Length = 200

 Score =  129 bits (323), Expect = 3e-29
 Identities = 67/121 (55%), Positives = 67/121 (55%)
 Frame = +3

Query: 9   YPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHIXXXXXXXXXXXX 188
           YPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHI            
Sbjct: 69  YPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHILPRPPPEPTPTP 128

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFAGTPGTNIPKNDMRNV 368
                                                     QFAGTPGTNIPKNDMRNV
Sbjct: 129 APAPAAVPPSASVPSTVVPPVAAPPSALLPMSAAGASAMSPMQFAGTPGTNIPKNDMRNV 188

Query: 369 M 371
           M
Sbjct: 189 M 189



>gi|12597881|gb|AAG60189.1|AC084763_9   hypothetical protein [Oryza sativa]
          Length = 202

 Score =  125 bits (314), Expect = 3e-28
 Identities = 68/125 (54%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHIXXX--XXXXX 176
           I YPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHI          
Sbjct: 67  IMYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHILPRPPPEPTP 126

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFAGTPGTNIPKND 356
                                                         QFAGTPGTNIPKND
Sbjct: 127 APAPAPAPATVPPAAPVPSTVVPPVAAPSSSLPPMSAAGASAMSPMQFAGTPGTNIPKND 186

Query: 357 MRNVM 371
           MRNVM
Sbjct: 187 MRNVM 191



>gi|22326900|ref|NP_197491.2|   SOH1 - like protein; protein id: At5g19910.1, supported by cDNA:
           gi_18176432 [Arabidopsis thaliana]
 gi|18176433|gb|AAL60043.1|   putative SOH1 protein [Arabidopsis thaliana]
          Length = 196

 Score = 98.2 bits (243), Expect = 6e-20
 Identities = 41/50 (82%), Positives = 47/50 (94%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHI 152
           I YPHCL+FLELLQN NFR AMAHPA+KE+AHRQQ+++WKNYRNNRLKHI
Sbjct: 81  IMYPHCLYFLELLQNPNFRTAMAHPANKELAHRQQFYYWKNYRNNRLKHI 130



>gi|12597880|gb|AAG60188.1|AC084763_8   hypothetical protein [Oryza sativa]
          Length = 140

 Score = 69.7 bits (169), Expect = 2e-11
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -3

Query: 370 MTFLMSFFGILVPGVPANCIGDMADAPAADIGSK 269
           MTFLMSFFGILVPGVPANCIGD+ADAPAADIG K
Sbjct: 1   MTFLMSFFGILVPGVPANCIGDIADAPAADIGGK 34



>gi|21912572|emb|CAD21541.1|   hypothetical protein [Taenia solium]
          Length = 148

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHI 152
           I YP CL  L+LLQ+ +FR  +AH +       Q    WKNY   R + +
Sbjct: 80  ITYPFCLHMLDLLQSPDFRREVAHESVTRFIDDQMLLHWKNYLRKRAEMV 129



>gi|7705592|ref|NP_057144.1|   CGI-125 protein [Homo sapiens]
 gi|4929719|gb|AAD34120.1|AF151883_1   CGI-125 protein [Homo sapiens]
 gi|15214807|gb|AAH12539.1|AAH12539   Similar to CGI-125 protein [Homo sapiens]
          Length = 131

 Score = 41.6 bits (96), Expect = 0.006
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLK 146
           +KYP CL  LELLQ  +FR  + +    +    QQ   W++Y   R++
Sbjct: 67  LKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRMR 114



>gi|12838342|dbj|BAB24169.1|   data source:SPTR, source key:Q9Y3C7, evidence:ISS~homolog to
           CGI-125 PROTEIN~putative [Mus musculus]
 gi|18044631|gb|AAH19685.1|   RIKEN cDNA 3110004H13 gene [Mus musculus]
          Length = 131

 Score = 41.2 bits (95), Expect = 0.008
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLK 146
           +KYP CL  LELLQ  +FR  + +    +    QQ   W++Y   R++
Sbjct: 67  LKYPQCLHMLELLQYEHFRKELVNAQCAKFIDEQQILHWQHYSRKRVR 114



>gi|13385570|ref|NP_080344.1|   RIKEN cDNA 3110004H13 [Mus musculus]
 gi|12851595|dbj|BAB29102.1|   data source:SPTR, source key:Q9Y3C7, evidence:ISS~homolog to
           CGI-125 PROTEIN~putative [Mus musculus]
          Length = 131

 Score = 41.2 bits (95), Expect = 0.008
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLK 146
           +KYP CL  LELLQ  +FR  + +    +    QQ   W++Y   R++
Sbjct: 67  LKYPQCLHMLELLQYEHFREELVNAQCAKFIDEQQILHWQHYSRKRVR 114



>gi|21355471|ref|NP_649483.1|   CG1057-PA [Drosophila melanogaster]
 gi|24644043|ref|NP_730861.1|   CG1057-PB [Drosophila melanogaster]
 gi|7296835|gb|AAF52111.1|   CG1057-PA [Drosophila melanogaster]
 gi|16769504|gb|AAL28971.1|   LD35644p [Drosophila melanogaster]
 gi|23170476|gb|AAN13286.1|AE003605_7   CG1057-PB [Drosophila melanogaster]
          Length = 204

 Score = 37.7 bits (86), Expect = 0.091
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHI 152
           + YP CL+FL+LLQ  +FR  + +    +    Q    W++Y   R+K I
Sbjct: 71  LMYPMCLYFLDLLQYEHFRREIVNSQCCKFIDDQAILQWQHYTRKRIKLI 120



>gi|17507087|ref|NP_492413.1|   Yeast SOH1 protein like [Caenorhabditis elegans]
 gi|7500362|pir||T21674   hypothetical protein F32H2.2 - Caenorhabditis elegans
 gi|3876622|emb|CAB04242.1|   Hypothetical protein F32H2.2 [Caenorhabditis elegans]
          Length = 163

 Score = 37.7 bits (86), Expect = 0.091
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNR 140
           +K+P CL  LE LQ+  FR++MA+  S +    Q    W+ Y   R
Sbjct: 60  LKFPQCLHMLEALQSQQFRDSMAYGPSAKFVEDQVVLQWQFYLRKR 105



>gi|25012209|gb|AAN71220.1|   GM28912p [Drosophila melanogaster]
          Length = 133

 Score = 37.4 bits (85), Expect = 0.12
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +3

Query: 9   YPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLKHI 152
           YP CL+FL+LLQ  +FR  + +    +    Q    W++Y   R+K I
Sbjct: 2   YPMCLYFLDLLQYEHFRREIVNSQCCKFIDDQAILQWQHYTRKRIKLI 49



>gi|21291658|gb|EAA03803.1|   agCP14777 [Anopheles gambiae str. PEST]
          Length = 129

 Score = 36.2 bits (82), Expect = 0.27
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFWKNYRNNRLK 146
           +K+P CL+FL+LLQ  +FR  +      +    Q    W++Y   R +
Sbjct: 69  LKFPMCLYFLDLLQYEHFRREIVSAQCCKFIDDQAILLWQHYTRRRTR 116



>gi|22095495|sp|Q55756|CARB_SYNY3   Carbamoyl-phosphate synthase large chain (Carbamoyl-phosphate
           synthetase ammonia chain)
          Length = 1081

 Score = 33.9 bits (76), Expect = 1.3
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = -1

Query: 522 ASKLSESEIKAYREKKNLKITLPLHNVVLELTSIFHSFTSLSFSFYHP 379
           A+K +E E++AYR  K+L IT P++ VV    + F +FT   +S Y P
Sbjct: 504 ATKTTEDEVRAYR--KSLGIT-PVYKVVDTCAAEFEAFTPYYYSTYEP 548



>gi|16331605|ref|NP_442333.1|   carbamoyl-phosphate synthase, pyrimidine-specific, large chain
           [Synechocystis sp. PCC 6803]
 gi|7438086|pir||S76557   carbamoyl-phosphate synthase (glutamine-hydrolyzing) (EC 6.3.5.5)
           large chain [similarity] - Synechocystis sp.  (strain
           PCC 6803)
 gi|1001668|dbj|BAA10403.1|   carbamoyl-phosphate synthase, pyrimidine-specific, large chain
           [Synechocystis sp. PCC 6803]
          Length = 1105

 Score = 33.9 bits (76), Expect = 1.3
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = -1

Query: 522 ASKLSESEIKAYREKKNLKITLPLHNVVLELTSIFHSFTSLSFSFYHP 379
           A+K +E E++AYR  K+L IT P++ VV    + F +FT   +S Y P
Sbjct: 528 ATKTTEDEVRAYR--KSLGIT-PVYKVVDTCAAEFEAFTPYYYSTYEP 572



>gi|22979438|gb|ZP_00025161.1|   hypothetical protein [Ralstonia metallidurans]
          Length = 390

 Score = 32.3 bits (72), Expect = 3.8
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
 Frame = -1

Query: 276 VAKLMGVQQQVEPQSTALMLMGAPPLVQVLAWELVQEEGGVRCALAYCSYSFSRRNIAAY 97
           VA + G+QQ       A ++ G+   +Q LAW L+  E    C +   +   S +NIA  
Sbjct: 149 VADIFGIQQ------FAAVMGGSLGGMQALAWSLMYPERLRHCIVVASTPKLSAQNIAFN 202

Query: 96  E--QLPCLLDVPLHSGNSHFGGAQERKG 19
           E  +   L D   H GN +    + ++G
Sbjct: 203 EVARSSILSDPDFHGGNYYAHNVKPKRG 230



>gi|7512029|pir||T13748   sex comb protein - fruit fly (Drosophila melanogaster)
 gi|3292939|emb|CAA04568.1|   Additional sex combs [Drosophila melanogaster]
          Length = 1668

 Score = 31.6 bits (70), Expect = 6.5
 Identities = 21/62 (33%), Positives = 31/62 (50%)
 Frame = +2

Query: 143  KAHLTPPSS*TNSHASTCTSGGAPISISAVDCGSTCCCTPISFATYVSSWCICHVSYAVC 322
            KA L PP++  N H  T T+  API+   ++  ST   TP+S  T  +      V+ A  
Sbjct: 1271 KAQLRPPAAILNQHQPTTTTAPAPINPVTLNV-STVAATPMSNITTATGSMAAAVAAAPP 1329

Query: 323  RN 328
            +N
Sbjct: 1330 QN 1331



>gi|24653657|ref|NP_725398.1|   CG8787-PA [Drosophila melanogaster]
 gi|7303175|gb|AAF58239.1|   CG8787-PA [Drosophila melanogaster]
          Length = 1669

 Score = 31.6 bits (70), Expect = 6.5
 Identities = 21/62 (33%), Positives = 31/62 (50%)
 Frame = +2

Query: 143  KAHLTPPSS*TNSHASTCTSGGAPISISAVDCGSTCCCTPISFATYVSSWCICHVSYAVC 322
            KA L PP++  N H  T T+  API+   ++  ST   TP+S  T  +      V+ A  
Sbjct: 1271 KAQLRPPAAILNQHQPTTTTAPAPINPVTLNV-STVAATPMSNITTATGSMAAAVAAAPP 1329

Query: 323  RN 328
            +N
Sbjct: 1330 QN 1331



>gi|19075359|ref|NP_587859.1|   conserved hypothetical protein [Schizosaccharomyces pombe]
 gi|7490384|pir||T41693   conserved hypothetical protein SPCP31B10.03c - fission yeast
           (Schizosaccharomyces pombe)
 gi|6066754|emb|CAB58369.1|   conserved hypothetical protein [Schizosaccharomyces pombe]
 gi|9937315|gb|AAG02413.1|AF284581_1   sep10p [Schizosaccharomyces pombe]
          Length = 139

 Score = 31.2 bits (69), Expect = 8.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +3

Query: 3   IKYPHCLFFLELLQNANFRNAMAHPASKEVAHRQQYFFW 119
           I YP CL  L LL+N  FRN ++     +  + + Y+ W
Sbjct: 66  IIYPTCLHMLTLLKNPQFRNDISRADLSKQVNDEIYYEW 104






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Dec 9, 2002  8:40 PM
  Number of letters in database: 397,579,747
  Number of sequences in database:  1,247,039
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 356,596,180
Number of Sequences: 1247039
Number of extensions: 6302267
Number of successful extensions: 18313
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 17653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18286
length of database: 397,579,747
effective HSP length: 115
effective length of database: 254,170,262
effective search space used: 18808599388
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)