BLASTX 2.2.5 [Nov-16-2002]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1039753661-09081-10136

Query= 
         (547 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,247,039 sequences; 397,579,747 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs

Taxonomy reports

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15226027|ref|NP_179097.1|  unknown protein; protein id: A...   218   3e-56 
gi|6648962|gb|AAF21309.1|  seed maturation protein PM23 [Gly...   192   3e-48 
gi|21536629|gb|AAM60961.1|  seed maturation-like protein [Ar...    99   3e-20 
gi|15242177|ref|NP_197001.1|  seed maturation -like protein;...    99   3e-20 
gi|17231303|ref|NP_487851.1|  hypothetical protein [Nostoc s...    43   0.003 
gi|15222486|ref|NP_176549.1|  unknown protein; protein id: A...    42   0.004 
gi|25404427|pir||B96661  unknown protein, 83181-85105 [impor...    42   0.004 
gi|23043765|gb|ZP_00075004.1|  hypothetical protein [Trichod...    40   0.021 
gi|17232657|ref|NP_489205.1|  hypothetical protein [Nostoc s...    40   0.021 
gi|581306|emb|CAA53070.1|  histidin kinase [Lactobacillus pl...    38   0.062 
gi|16331041|ref|NP_441769.1|  unknown protein [Synechocystis...    38   0.062 
gi|23127708|gb|ZP_00109571.1|  hypothetical protein [Nostoc ...    38   0.081 
gi|23133544|gb|ZP_00115318.1|  hypothetical protein [Synecho...    37   0.14  
gi|23122461|gb|ZP_00104596.1|  hypothetical protein [Prochlo...    37   0.14  
gi|23613288|ref|NP_703610.1|  hypothetical protein [Plasmodi...    37   0.18  
gi|22299567|ref|NP_682814.1|  ORF_ID:tll2024~hypothetical pr...    35   0.40  
gi|16330948|ref|NP_441676.1|  hypothetical protein [Synechoc...    35   0.40  
gi|24414838|emb|CAD55651.1|  hypothetical protein [Synechoco...    35   0.69  
gi|23101971|gb|ZP_00088507.1|  hypothetical protein [Azotoba...    35   0.69  
gi|20090774|ref|NP_616849.1|  conserved hypothetical protein...    35   0.69  
gi|15668751|ref|NP_247550.1|  aspartate kinase (lysC) [Metha...    34   0.90  
gi|3766232|gb|AAC64407.1|  kinectin [Vulpes vulpes]                34   0.90  
gi|5869760|emb|CAA49829.1|  p93 [Borrelia burgdorferi]             34   0.90  
gi|23509492|ref|NP_702159.1|  ribosomal protein L15, putativ...    34   0.90  
gi|23478398|gb|EAA15496.1|  hypothetical protein [Plasmodium...    34   1.2   
gi|17230579|ref|NP_487127.1|  hypothetical protein [Nostoc s...    34   1.2   
gi|559543|gb|AAB58346.1|  p93 antigen                              33   1.5   
gi|2120490|pir||S61463  p83/100 protein - Lyme disease spiro...    33   1.5   
gi|2120487|pir||S61464  p83/100 protein - Lyme disease spiro...    33   1.5   
gi|853736|emb|CAA54797.1|  P97 protein [Borrelia burgdorferi]      33   1.5   
gi|2120492|pir||I40090  p93 protein - Lyme disease spirochet...    33   1.5   
gi|346275|pir||A45033  myelin transcription factor 1 - human...    33   1.5   
gi|1272517|emb|CAA57125.1|  p83/100 [Borrelia burgdorferi]         33   1.5   
gi|7463732|pir||S61460  p83/100 protein - Lyme disease spiro...    33   1.5   
gi|15595089|ref|NP_212878.1|  antigen, p83/100 [Borrelia bur...    33   1.5   
gi|5689437|dbj|BAA83002.1|  KIAA1050 protein [Homo sapiens]        33   2.0   
gi|1076739|pir||S53306  MADS box protein MADS1 - rice >gi|50...    33   2.0   
gi|16078573|ref|NP_389392.1|  similar to hypothetical protei...    33   2.0   
gi|17975763|ref|NP_004526.1|  myelin transcription factor 1;...    33   2.0   
gi|9246936|gb|AAF86209.1|  VrrB [Bacillus anthracis]               33   2.6   
gi|9246917|gb|AAF86199.1|AF238885_2  VrrB [Bacillus anthracis]     33   2.6   
gi|23482118|gb|EAA18193.1|  hypothetical protein [Plasmodium...    33   2.6   
gi|2147891|pir||S61461  p83/100 protein - Borrelia garinii (...    33   2.6   
gi|7512169|pir||T14156  kinesin-related protein - African cl...    33   2.6   
gi|9246944|gb|AAF86213.1|  VrrB [Bacillus anthracis]               33   2.6   
gi|9246946|gb|AAF86214.1|  VrrB [Bacillus anthracis]               33   2.6   
gi|20349232|ref|XP_111984.1|  similar to RIKEN cDNA C330016H...    33   2.6   
gi|9246930|gb|AAF86206.1|  VrrB [Bacillus anthracis]               33   2.6   
gi|9246926|gb|AAF86204.1|  VrrB [Bacillus anthracis]               33   2.6   
gi|15054439|gb|AAK77948.1|  M protein [Streptococcus pyogenes]     32   3.4   
gi|7959339|dbj|BAA96060.1|  KIAA1536 protein [Homo sapiens]        32   3.4   
gi|20094860|ref|NP_614707.1|  Valyl-tRNA synthetase [Methano...    32   3.4   
gi|23123455|gb|ZP_00105590.1|  hypothetical protein [Prochlo...    32   3.4   
gi|24647540|ref|NP_524896.2|  CG11648-PB [Drosophila melanog...    32   3.4   
gi|2120494|pir||I40141  p93 protein - Lyme disease spirochet...    32   3.4   
gi|226723|prf||1604246A  Abdominal-B gene                          32   3.4   
gi|321026|pir||A34220  homeotic protein Abd-B - fruit fly (D...    32   3.4   
gi|14042878|dbj|BAB55428.1|  unnamed protein product [Homo s...    32   3.4   
gi|2120489|pir||S61462  p83/100 protein - Lyme disease spiro...    32   3.4   
gi|17647993|ref|NP_524080.1|  CG18492-PA [Drosophila melanog...    32   3.4   
gi|6942201|gb|AAF32355.1|AF220353_1  kinesin-like kinetochor...    32   3.4   
gi|24583666|ref|NP_524993.2|  CG6392-PA [Drosophila melanoga...    32   3.4   
gi|14149742|ref|NP_065949.1|  KIAA1536 protein [Homo sapiens...    32   3.4   
gi|1711385|sp|P54214|SFAS_DUNBI  SF-assemblin >gi|1279362|em...    32   4.5   
gi|26006217|dbj|BAC41451.1|  mKIAA0835 protein [Mus musculus]      32   4.5   
gi|23346429|ref|NP_032691.2|  myelin transcription factor 1;...    32   4.5   
gi|15149491|ref|NP_150373.1|  E2F transcription factor 6 [Mu...    32   5.8   
gi|17352153|gb|AAL38216.1|AF393249_1  E2F6a [Mus musculus]         32   5.8   
gi|21306289|gb|AAM45941.1|AF487711_1  transcriptional repres...    32   5.8   
gi|24943010|gb|AAM98022.2|  Hypothetical protein F35D11.11d ...    32   5.8   
gi|17533741|ref|NP_494820.1|  M protein repeat containing pr...    32   5.8   
gi|24664026|ref|NP_729947.1|  CG32133-PA [Drosophila melanog...    32   5.8   
gi|20151561|gb|AAM11140.1|  LD14856p [Drosophila melanogaster]     32   5.8   
gi|21241330|ref|NP_640912.1|  conserved hypothetical protein...    32   5.8   
gi|17533739|ref|NP_494819.1|  M protein repeat containing pr...    32   5.8   
gi|17533743|ref|NP_494821.1|  M protein repeat containing pr...    32   5.8   
gi|18391490|ref|NP_563924.1|  putative nuclear matrix consti...    32   5.8   
gi|24666890|ref|NP_649137.2|  CG8789-PA [Drosophila melanoga...    32   5.8   
gi|17352154|gb|AAL38217.1|AF393249_2  E2F6b [Mus musculus] >...    32   5.8   
gi|436324|emb|CAA49311.1|  p93 [Borrelia burgdorferi]              32   5.8   
gi|436320|emb|CAA49309.1|  p93 [Borrelia burgdorferi]              32   5.8   
gi|540929|pir||S40308  p100 protein - Lyme disease spirochet...    32   5.8   
gi|8394429|ref|NP_058876.1|  T-cell death associated gene [R...    31   7.6   
gi|25140993|ref|NP_705938.1|  pleiomorphic adenoma gene-like...    31   7.6   
gi|20807169|ref|NP_622340.1|  Methyl-accepting chemotaxis pr...    31   7.6   
gi|6678269|ref|NP_033370.1|  pleckstrin homology-like domain...    31   7.6   
gi|18310846|ref|NP_562780.1|  hypothetical protein [Clostrid...    31   7.6   
gi|17569047|ref|NP_509136.1|  Yeast Mitosis Arrest DeFicient...    31   7.6   
gi|16804026|ref|NP_465511.1|  similar to 2-isopropylmalate s...    31   7.6   
gi|1706291|sp|P54682|D7_DICDI  CAMP-INDUCIBLE PRESPORE PROTE...    31   7.6   
gi|23485570|gb|EAA20475.1|  235 kDa rhoptry protein [Plasmod...    31   7.6   
gi|20481618|ref|XP_118485.1|  hypothetical protein XP_118485...    31   7.6   
gi|18203969|gb|AAH21315.1|  Similar to hypothetical protein ...    31   10.0  
gi|9246934|gb|AAF86208.1|  VrrB [Bacillus anthracis]               31   10.0  
gi|21287734|gb|EAA00055.1|  agCP9352 [Anopheles gambiae str....    31   10.0  
gi|17137166|ref|NP_477144.1|  CG10379-PA [Drosophila melanog...    31   10.0  
gi|14521300|ref|NP_126775.1|  hypothetical protein [Pyrococc...    31   10.0  
gi|6981040|ref|NP_037207.1|  homeobox A1 protein [Rattus nor...    31   10.0  
gi|21294035|gb|EAA06180.1|  agCP13478 [Anopheles gambiae str...    31   10.0  
gi|3851331|emb|CAA70484.1|  putative MADS-domain transcripti...    31   10.0  

Alignments


>gi|15226027|ref|NP_179097.1|   unknown protein; protein id: At2g14910.1, supported by cDNA:
           gi_17380883, supported by cDNA: gi_19698842, supported
           by cDNA: gi_20465934 [Arabidopsis thaliana]
 gi|25368604|pir||H84522   hypothetical protein At2g14910 [imported] - Arabidopsis thaliana
 gi|3650033|gb|AAC61288.1|   unknown protein [Arabidopsis thaliana]
 gi|17380884|gb|AAL36254.1|   unknown protein [Arabidopsis thaliana]
 gi|19698843|gb|AAL91157.1|   unknown protein [Arabidopsis thaliana]
 gi|20465935|gb|AAM20153.1|   unknown protein [Arabidopsis thaliana]
          Length = 386

 Score =  218 bits (555), Expect = 3e-56
 Identities = 111/162 (68%), Positives = 129/162 (79%), Gaps = 4/162 (2%)
 Frame = +1

Query: 73  EDLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTP 252
           E LG ++ + ++YI++LQSQL ++KKEL ++RRKN+ALQMQQFVGEEKNDLLDYLRSL P
Sbjct: 209 EGLGRVSSEAQEYILRLQSQLSSVKKELQEMRRKNAALQMQQFVGEEKNDLLDYLRSLQP 268

Query: 253 EKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAP----PPXXXXXXXXXXXXXEDD 420
           EKVAELSE  +P V+E IHSVVHGLLATLSPK+HSK P    PP              D+
Sbjct: 269 EKVAELSEPAAPEVKETIHSVVHGLLATLSPKMHSKFPASEVPP------TETVKAKSDE 322

Query: 421 DCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLE 546
           DCAELVEN SL FQPLIS+ RDYLARLLFWCMLLGHY+RGLE
Sbjct: 323 DCAELVENTSLQFQPLISLTRDYLARLLFWCMLLGHYLRGLE 364



>gi|6648962|gb|AAF21309.1|   seed maturation protein PM23 [Glycine max]
          Length = 404

 Score =  192 bits (487), Expect = 3e-48
 Identities = 96/173 (55%), Positives = 127/173 (73%)
 Frame = +1

Query: 25  KTLKKMMKNYHVKLVGEDLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFV 204
           K L   ++  H ++  ++LG ++ + + YI  LQS+L +MKKELH+++RK++ALQMQQFV
Sbjct: 207 KNLSSKVEKLHEEVDIQELGEISAEAQQYIFNLQSRLSSMKKELHEVKRKSAALQMQQFV 266

Query: 205 GEEKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPXXXX 384
           GEEKNDLLDYLRSL PE+VA+LSE TSP +++ I SVVHGLLATLSPK+HSK  P     
Sbjct: 267 GEEKNDLLDYLRSLQPEQVAQLSEFTSPELKDTILSVVHGLLATLSPKMHSK--PSTMSE 324

Query: 385 XXXXXXXXXEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGL 543
                      +DCAE++EN++L FQP+IS+ RDYLARLLFWCML    + GL
Sbjct: 325 NTTVGATNAGSEDCAEVLENSALQFQPVISLTRDYLARLLFWCMLWDTILEGL 377



>gi|21536629|gb|AAM60961.1|   seed maturation-like protein [Arabidopsis thaliana]
          Length = 355

 Score = 99.0 bits (245), Expect = 3e-20
 Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 7/169 (4%)
 Frame = +1

Query: 61  KLVGEDLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLR 240
           +L  +  G+L+P+   YI  LQS+L +MK+EL   ++K   ++ ++     +NDLLDYLR
Sbjct: 201 RLSPQVFGDLSPEALSYIQLLQSELSSMKEELDSQKKKALRIECEK---GNRNDLLDYLR 257

Query: 241 SLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPXXXXXXXXXXXXXEDD 420
           SL PE V ELS+ +SP V+E ++ +V  +L  L                        ED 
Sbjct: 258 SLDPEMVTELSQLSSPEVEEIVNQLVQNVLERL-----------------------FEDQ 294

Query: 421 DCAELVENASLPFQP-------LISVPRDYLARLLFWCMLLGHYIRGLE 546
             +  ++N  +            +   RDYLA+LLFWCMLLGH++RGLE
Sbjct: 295 TTSNFMQNPGIRTTDGGDGTGRKVDTSRDYLAKLLFWCMLLGHHLRGLE 343



>gi|15242177|ref|NP_197001.1|   seed maturation -like protein; protein id: At5g14970.1, supported
           by cDNA: 106301. [Arabidopsis thaliana]
 gi|11346180|pir||T51442   seed maturation-like protein - Arabidopsis thaliana
 gi|9755664|emb|CAC01816.1|   seed maturation-like protein [Arabidopsis thaliana]
 gi|22655278|gb|AAM98229.1|   seed maturation-like protein [Arabidopsis thaliana]
          Length = 355

 Score = 99.0 bits (245), Expect = 3e-20
 Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 7/169 (4%)
 Frame = +1

Query: 61  KLVGEDLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLR 240
           +L  +  G+L+P+   YI  LQS+L +MK+EL   ++K   ++ ++     +NDLLDYLR
Sbjct: 201 RLSPQVFGDLSPEALSYIQLLQSELSSMKEELDSQKKKALRIECEK---GNRNDLLDYLR 257

Query: 241 SLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPXXXXXXXXXXXXXEDD 420
           SL PE V ELS+ +SP V+E ++ +V  +L  L                        ED 
Sbjct: 258 SLDPEMVTELSQLSSPEVEEIVNQLVQNVLERL-----------------------FEDQ 294

Query: 421 DCAELVENASLPFQP-------LISVPRDYLARLLFWCMLLGHYIRGLE 546
             +  ++N  +            +   RDYLA+LLFWCMLLGH++RGLE
Sbjct: 295 TTSNFMQNPGIRTTEGGDGTGRKVDTSRDYLAKLLFWCMLLGHHLRGLE 343



>gi|17231303|ref|NP_487851.1|   hypothetical protein [Nostoc sp. PCC 7120]
 gi|25531703|pir||AD2282   hypothetical protein alr3811 [imported] - Nostoc sp. (strain PCC
           7120)
 gi|8489798|gb|AAF75756.1|AF262216_3   unknown [Nostoc sp. PCC 7120]
 gi|17132945|dbj|BAB75510.1|   ORF_ID:alr3811~hypothetical protein [Nostoc sp. PCC 7120]
          Length = 157

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 36/146 (24%), Positives = 57/146 (39%)
 Frame = +1

Query: 109 YIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTPEKVAELSESTSP 288
           Y+  L S    + +E     + N   +      E  N L  Y++SL+PE V +LS+ TSP
Sbjct: 27  YLKPLSSHPPVLLQEEKVSNQSNRVSEFFNSDSETANLLWQYVKSLSPETVTQLSKPTSP 86

Query: 289 GVQEAIHSVVHGLLATLSPKIHSKAPPPXXXXXXXXXXXXXEDDDCAELVENASLPFQPL 468
            V + +   + GLL  L P+                                    F   
Sbjct: 87  EVFQVMERNIIGLLGNLPPE-----------------------------------HFGVT 111

Query: 469 ISVPRDYLARLLFWCMLLGHYIRGLE 546
           I+  R++L RLL   M+ G+++R  E
Sbjct: 112 ITTSREHLGRLLASAMISGYFLRNAE 137



>gi|15222486|ref|NP_176549.1|   unknown protein; protein id: At1g63610.1 [Arabidopsis thaliana]
          Length = 334

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 32/144 (22%), Positives = 63/144 (43%)
 Frame = +1

Query: 115 IQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTPEKVAELSESTSPGV 294
           I  +  ++ ++ E+ +L R     Q+ +    ++N++L+YL+SL P+ + EL+ +    V
Sbjct: 206 IDAKKYIELLEAEIEELNR-----QVGRKSANQQNEILEYLKSLEPQNLKELTSTAGEDV 260

Query: 295 QEAIHSVVHGLLATLSPKIHSKAPPPXXXXXXXXXXXXXEDDDCAELVENASLPFQPLIS 474
             A+++ V  LLA   P                            ++  N +        
Sbjct: 261 AVAMNTFVKRLLAVSDPN---------------------------QMKTNVT-------E 286

Query: 475 VPRDYLARLLFWCMLLGHYIRGLE 546
                LA+LL+W M++G+ IR +E
Sbjct: 287 TSAADLAKLLYWLMVVGYSIRNIE 310



>gi|25404427|pir||B96661   unknown protein, 83181-85105 [imported] - Arabidopsis thaliana
 gi|12324944|gb|AAG52423.1|AC011622_11   unknown protein; 83181-85105 [Arabidopsis thaliana]
          Length = 340

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 32/144 (22%), Positives = 63/144 (43%)
 Frame = +1

Query: 115 IQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTPEKVAELSESTSPGV 294
           I  +  ++ ++ E+ +L R     Q+ +    ++N++L+YL+SL P+ + EL+ +    V
Sbjct: 212 IDAKKYIELLEAEIEELNR-----QVGRKSANQQNEILEYLKSLEPQNLKELTSTAGEDV 266

Query: 295 QEAIHSVVHGLLATLSPKIHSKAPPPXXXXXXXXXXXXXEDDDCAELVENASLPFQPLIS 474
             A+++ V  LLA   P                            ++  N +        
Sbjct: 267 AVAMNTFVKRLLAVSDPN---------------------------QMKTNVT-------E 292

Query: 475 VPRDYLARLLFWCMLLGHYIRGLE 546
                LA+LL+W M++G+ IR +E
Sbjct: 293 TSAADLAKLLYWLMVVGYSIRNIE 316



>gi|23043765|gb|ZP_00075004.1|   hypothetical protein [Trichodesmium erythraeum IMS101]
          Length = 583

 Score = 39.7 bits (91), Expect = 0.021
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 18/114 (15%)
 Frame = +1

Query: 58  VKLVGEDLGN----LTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKND- 222
           +KLV +DL N    LT Q+   + +L+++ + + ++++ LR++   LQ+QQ     +   
Sbjct: 24  LKLVIQDLDNFRQDLTHQLGQDVSRLRAEKEQLNEDVNKLRKQYEQLQVQQLESLSQRQI 83

Query: 223 -------------LLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSP 345
                        L + L+     K+ EL ES  PG+Q+ + S   GL  T SP
Sbjct: 84  AQQQLWLKQLAQVLANNLQKQLGHKIKELKESVDPGLQQGVSS-GGGLPMTNSP 136



>gi|17232657|ref|NP_489205.1|   hypothetical protein [Nostoc sp. PCC 7120]
 gi|25308194|pir||AE2451   hypothetical protein all5165 [imported] - Nostoc sp. (strain PCC
           7120)
 gi|17134303|dbj|BAB76864.1|   ORF_ID:all5165~hypothetical protein [Nostoc sp. PCC 7120]
          Length = 114

 Score = 39.7 bits (91), Expect = 0.021
 Identities = 20/62 (32%), Positives = 35/62 (56%)
 Frame = +1

Query: 154 LHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLA 333
           L+D   +++   +    GE  N LL YL+  +PE +A +++S SP +++ I   V GL+ 
Sbjct: 8   LNDNSEEHTNQILSDHFGEHPNQLLKYLQHQSPEVLARVAQSVSPEIKQIISQNVQGLVG 67

Query: 334 TL 339
            L
Sbjct: 68  ML 69



>gi|581306|emb|CAA53070.1|   histidin kinase [Lactobacillus plantarum]
 gi|1495670|emb|CAA64205.1|   histidine protein kinase PlnB [Lactobacillus plantarum]
          Length = 442

 Score = 38.1 bits (87), Expect = 0.062
 Identities = 26/90 (28%), Positives = 46/90 (51%)
 Frame = +1

Query: 61  KLVGEDLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLR 240
           K+  E L N   Q+ DY+  ++ Q   ++K  HD +   ++L  Q  + E K+ L DY +
Sbjct: 224 KIAAEKLQN--KQLNDYLKSVEHQYLELRKFKHDYKNLIASLNTQDNISEIKDYLTDYTQ 281

Query: 241 SLTPEKVAELSESTSPGVQEAIHSVVHGLL 330
           S   E  A L++ +   VQ   + ++ GL+
Sbjct: 282 S--GEFRASLNDGSIASVQHLKNEILRGLV 309



>gi|16331041|ref|NP_441769.1|   unknown protein [Synechocystis sp. PCC 6803]
 gi|7446611|pir||S76190   hypothetical protein - Synechocystis sp. (strain PCC 6803)
 gi|1653536|dbj|BAA18449.1|   ORF_ID:slr1638~unknown protein [Synechocystis sp. PCC 6803]
          Length = 107

 Score = 38.1 bits (87), Expect = 0.062
 Identities = 18/41 (43%), Positives = 26/41 (63%)
 Frame = +1

Query: 217 NDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATL 339
           N LL YL+   PE +A +++S SP ++E IH  V GL+  L
Sbjct: 18  NTLLQYLQKQHPETLAWIAQSASPEIKEIIHQNVQGLVGML 58



>gi|23127708|gb|ZP_00109571.1|   hypothetical protein [Nostoc punctiforme]
          Length = 114

 Score = 37.7 bits (86), Expect = 0.081
 Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
 Frame = +1

Query: 211 EKNDLL-DYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPXXXXX 387
           E NDLL  Y++SL+PE V +LS+ TS  V + +   + GLL  L P  H           
Sbjct: 17  ETNDLLWQYVKSLSPETVTQLSKPTSAEVFQVMERNITGLLGNL-PSEH----------- 64

Query: 388 XXXXXXXXEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLE 546
                                  F   +S  R+ L RLL   M+ G+++R  E
Sbjct: 65  -----------------------FGITVSTSRESLGRLLASAMISGYFLRNAE 94



>gi|23133544|gb|ZP_00115318.1|   hypothetical protein [Synechococcus sp. WH 8102]
          Length = 117

 Score = 37.0 bits (84), Expect = 0.14
 Identities = 28/114 (24%), Positives = 47/114 (41%)
 Frame = +1

Query: 205 GEEKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPXXXX 384
           G+  N L+ YL+  TP+ +  +++S S  +Q+ I   V GLL  L P  H          
Sbjct: 14  GQAGNSLIQYLQEQTPDTLQRVAKSASNDIQDIIRHNVQGLLGML-PGEH---------- 62

Query: 385 XXXXXXXXXEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLE 546
                                   F+  ++  RD LA +L   M+ G+++R +E
Sbjct: 63  ------------------------FEVKVTANRDNLANMLASAMMTGYFLRQME 92



>gi|23122461|gb|ZP_00104596.1|   hypothetical protein [Prochlorococcus marinus subsp. pastoris str.
           CCMP1378]
          Length = 112

 Score = 37.0 bits (84), Expect = 0.14
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = +1

Query: 211 EKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATL 339
           ++NDL+ YL+  +PE +  +++S S  +QE I   V GLL  L
Sbjct: 16  DENDLIQYLQKQSPEVMQRVAKSASEDIQEIIRHNVQGLLGML 58



>gi|23613288|ref|NP_703610.1|   hypothetical protein [Plasmodium falciparum 3D7]
 gi|23504849|emb|CAD51630.1|   hypothetical protein [Plasmodium falciparum 3D7]
          Length = 796

 Score = 36.6 bits (83), Expect = 0.18
 Identities = 30/148 (20%), Positives = 68/148 (45%)
 Frame = +1

Query: 103  EDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTPEKVAELSEST 282
            ++YI+ L+ ++++++K+L+ L+   + L          +DLL Y++SLT  ++  L+++ 
Sbjct: 677  KNYILFLRKKINSLEKQLNILKESKTFLN---------DDLLSYIKSLTEIQLRSLTDNI 727

Query: 283  SPGVQEAIHSVVHGLLATLSPKIHSKAPPPXXXXXXXXXXXXXEDDDCAELVENASLPFQ 462
             P V ++   +V  ++  ++  I+                            +N S    
Sbjct: 728  GPLVLDSTKKIVELVIQGMTLNIN----------------------------KNMS---N 756

Query: 463  PLISVPRDYLARLLFWCMLLGHYIRGLE 546
             LI V    L  + FW +++G+ +R +E
Sbjct: 757  ELIYVSGSVLTYICFWQLIIGYTLREME 784



>gi|22299567|ref|NP_682814.1|   ORF_ID:tll2024~hypothetical protein [Thermosynechococcus elongatus
           BP-1]
 gi|22295751|dbj|BAC09576.1|   ORF_ID:tll2024~hypothetical protein [Thermosynechococcus elongatus
           BP-1]
          Length = 110

 Score = 35.4 bits (80), Expect = 0.40
 Identities = 29/112 (25%), Positives = 45/112 (40%)
 Frame = +1

Query: 211 EKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPXXXXXX 390
           + N LL YL+S +PE +  ++ S SP +++ I   V GL+  L                 
Sbjct: 19  QPNLLLKYLQSQSPEVLTRIARSVSPEIRQIISQNVQGLVGGL----------------- 61

Query: 391 XXXXXXXEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLE 546
                              S  F   I+  RD LA LL   M+ G+++R +E
Sbjct: 62  ------------------PSEDFNVQIATDRDNLAGLLASAMMTGYFLRQME 95



>gi|16330948|ref|NP_441676.1|   hypothetical protein [Synechocystis sp. PCC 6803]
 gi|7446610|pir||S75897   hypothetical protein slr1674 - Synechocystis sp. (strain PCC 6803)
 gi|1653442|dbj|BAA18356.1|   ORF_ID:slr1674~hypothetical protein [Synechocystis sp. PCC 6803]
          Length = 116

 Score = 35.4 bits (80), Expect = 0.40
 Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
 Frame = +1

Query: 199 FVGEE---KNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPP 369
           F G E   K+ L  Y++ L+PE +A+LS   S  V + +   + GLL  L P+       
Sbjct: 12  FAGNEAPGKDSLWTYVQELSPETIAQLSRPDSQEVFQVMERNIIGLLGNLPPE------- 64

Query: 370 PXXXXXXXXXXXXXEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLE 546
                                        F   IS  R+ L RLL   M+ G+++R  E
Sbjct: 65  ----------------------------HFGVTISTSRENLGRLLASAMMSGYFLRNAE 95



>gi|24414838|emb|CAD55651.1|   hypothetical protein [Synechococcus sp. PCC 7942]
          Length = 125

 Score = 34.7 bits (78), Expect = 0.69
 Identities = 29/110 (26%), Positives = 44/110 (40%)
 Frame = +1

Query: 217 NDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPPPXXXXXXXX 396
           N LL YL+  +PE +A +++S +  +QE I   V GLL  L                   
Sbjct: 18  NALLQYLQHQSPEVMARVAKSATSDIQEIIQQNVQGLLGML------------------- 58

Query: 397 XXXXXEDDDCAELVENASLPFQPLISVPRDYLARLLFWCMLLGHYIRGLE 546
                            S  F   I+  R+ LA LL   M+ G+++R +E
Sbjct: 59  ----------------PSEGFNVQIATSRENLAGLLASAMMTGYFLRQME 92



>gi|23101971|gb|ZP_00088507.1|   hypothetical protein [Azotobacter vinelandii]
          Length = 1101

 Score = 34.7 bits (78), Expect = 0.69
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
 Frame = +1

Query: 28   TLKKMMKNYHVKLVGEDLGNLTPQVEDYIIQLQSQLDAMKKEL-----HDLRRKNSALQM 192
            T +++ K Y   L  EDLG++      +  +LQ QL ++ ++L        +R + AL++
Sbjct: 748  TQRELAKEYFPTLAPEDLGDIIELERKHTRELQQQLKSLSEKLSYQQAELAKRMSDALKV 807

Query: 193  Q----QFVGEEKNDL---LDYLRSLTPEKVAE--------LSESTSPGVQEAIHSVVH 321
                   VG E  D+   L+ LR LT E + E        L+ S+  GV + +  + H
Sbjct: 808  DTGALSEVGRELADIPKYLERLRVLTEEALPEKLKRFLEYLNRSSDDGVTQLLSYIDH 865



>gi|20090774|ref|NP_616849.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
 gi|19915835|gb|AAM05329.1|   conserved hypothetical protein [Methanosarcina acetivorans str.
           C2A]
          Length = 190

 Score = 34.7 bits (78), Expect = 0.69
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
 Frame = +1

Query: 34  KKMMKNYHVKLVGEDLGNLTPQV-------EDYII-----QLQSQLDAMKKELHDLRRKN 177
           K   K Y +KL    +  +TPQ+       E+Y        +Q  +D     LH+    N
Sbjct: 3   KTFEKVYQLKL---SMKGITPQIWRRIQVPENYTFLDLHDAIQDVMDWEDYHLHEFEMPN 59

Query: 178 SALQMQQFVGEEKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHG 324
               +   +G E +D   ++  L PEK A++S   +P  ++A+++   G
Sbjct: 60  PKTGVLDKIGTEGDDFEAFVEPLVPEKKAKISNYFTPENKDALYTYDFG 108



>gi|15668751|ref|NP_247550.1|   aspartate kinase (lysC) [Methanococcus jannaschii]
 gi|2492982|sp|Q57991|AK_METJA   Probable aspartokinase (Aspartate kinase)
 gi|2127773|pir||C64371   aspartate kinase (EC 2.7.2.4) I - Methanococcus jannaschii
 gi|1591278|gb|AAB98565.1|   aspartate kinase (lysC) [Methanococcus jannaschii]
          Length = 473

 Score = 34.3 bits (77), Expect = 0.90
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
 Frame = +1

Query: 79  LGNLTPQVEDYIIQLQSQLDA--MKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTP 252
           LG LTP+  DYI+    +L +  +   + DL  K+ AL+     G E   + D       
Sbjct: 114 LGELTPKSRDYILSFGERLSSPILSGAIRDLGEKSIALE-----GGEAGIITDNNFGSAR 168

Query: 253 EKVAELSESTSPGVQEAIHSVVHGLLAT 336
            K  E+ E   P ++E I  VV G + T
Sbjct: 169 VKRLEVKERLLPLLKEGIIPVVTGFIGT 196



>gi|3766232|gb|AAC64407.1|   kinectin [Vulpes vulpes]
          Length = 1330

 Score = 34.3 bits (77), Expect = 0.90
 Identities = 27/99 (27%), Positives = 48/99 (48%)
 Frame = +1

Query: 73   EDLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTP 252
            E+L  +  + E  I  LQ++LD++K+ +   R+KN+ L+ + +   E  + L     +  
Sbjct: 995  EELLKVISEREKEITGLQNELDSLKEAVEHQRKKNNDLREKNW---EAMEALASTEKMLQ 1051

Query: 253  EKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAPP 369
            +KV + S+       EAI      +L  L PK+    PP
Sbjct: 1052 DKVNKTSKVERQQYVEAIELEAKEVLKKLFPKV--SVPP 1088



>gi|5869760|emb|CAA49829.1|   p93 [Borrelia burgdorferi]
          Length = 708

 Score = 34.3 bits (77), Expect = 0.90
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +1

Query: 67  VGEDLGNLTPQVE-----DYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLD 231
           + E + NL  Q+E     ++  +++SQ+DA KKE  +L +K   L   Q   +   D LD
Sbjct: 258 ITETIENLRDQLEKATDEEHKKEIESQVDAKKKEKEELDKKAINLDKAQQKLDSAEDNLD 317

Query: 232 YLRSLTPEKVAE 267
             R    EK+ E
Sbjct: 318 VQRDTVREKIQE 329



>gi|23509492|ref|NP_702159.1|   ribosomal protein L15, putative [Plasmodium falciparum 3D7]
 gi|23497338|gb|AAN36883.1|AE014820_33   ribosomal protein L15, putative [Plasmodium falciparum 3D7]
          Length = 545

 Score = 34.3 bits (77), Expect = 0.90
 Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
 Frame = +1

Query: 10  KKICCKTLKKMMKNYHVKLVGEDLGNLT---PQVEDYIIQLQSQLDAMKKELHDLRRKNS 180
           K++  K LK  ++   +K + E++ N T   P  E+    LQ+ +  M++ +  + ++  
Sbjct: 155 KRLISKKLK--LRREQLKKIEEEINNGTYKSPYNEEQREFLQNVIKEMEQAIEPINKEIE 212

Query: 181 ALQMQQF-VGEEKNDLLDYLRSLTPEKVAELS 273
            ++  +F V +EKNDLL  LR    +K+ E++
Sbjct: 213 QIEKNRFLVFDEKNDLLVKLREQIEKKIDEVN 244



>gi|23478398|gb|EAA15496.1|   hypothetical protein [Plasmodium yoelii yoelii]
          Length = 662

 Score = 33.9 bits (76), Expect = 1.2
 Identities = 18/88 (20%), Positives = 47/88 (53%)
 Frame = +1

Query: 103 EDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTPEKVAELSEST 282
           ++YII L+ ++++++ +L  L+   +          + +DLL Y++SLT  ++  L+++ 
Sbjct: 543 KNYIIFLKKKINSLENQLKTLKENKTF---------QNDDLLSYIKSLTDIQLRSLTDNI 593

Query: 283 SPGVQEAIHSVVHGLLATLSPKIHSKAP 366
              V +A   +V  ++  ++  ++   P
Sbjct: 594 GAVVLDATKKIVELVIQGMTLNVNKNLP 621



>gi|17230579|ref|NP_487127.1|   hypothetical protein [Nostoc sp. PCC 7120]
 gi|25534583|pir||AH2191   hypothetical protein all3087 [imported] - Nostoc sp. (strain PCC
           7120)
 gi|17132181|dbj|BAB74786.1|   ORF_ID:all3087~hypothetical protein [Nostoc sp. PCC 7120]
          Length = 542

 Score = 33.9 bits (76), Expect = 1.2
 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
 Frame = +1

Query: 85  NLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDY-----LRSLT 249
           NL  Q+ D I Q +S +D   +EL  L R   AL+ +Q  G +   +L+      L SLT
Sbjct: 66  NLEQQIVDAISQAKSTIDVAVQELR-LPRIAQALKDKQKAGIKVRVILENTYTRSLSSLT 124

Query: 250 PEKVAELSESTSPGVQE 300
           PE+V +L E      QE
Sbjct: 125 PEEVKKLPEREQARYQE 141



>gi|559543|gb|AAB58346.1|   p93 antigen
          Length = 693

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +1

Query: 67  VGEDLGNLTPQVE-----DYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLD 231
           + E + NL  Q+E     ++  +++SQ+DA KK+  +L +K   L   Q   +   D LD
Sbjct: 258 ITETIENLRDQLEKATDEEHRKEIESQVDAKKKQKEELDKKAIDLDKAQQKLDSSEDNLD 317

Query: 232 YLRSLTPEKVAE 267
             R    EK+ E
Sbjct: 318 IQRDTVREKIQE 329



>gi|2120490|pir||S61463   p83/100 protein - Lyme disease spirochete (strain TN)
 gi|928989|emb|CAA53022.1|   p100 protein [Borrelia burgdorferi]
          Length = 672

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +1

Query: 67  VGEDLGNLTPQVE-----DYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLD 231
           + E + NL  Q+E     ++  +++SQ+DA KK+  +L +K   L   Q   +   D LD
Sbjct: 237 ITETIENLRDQLEKATDEEHRKEIESQVDAKKKQKEELDKKAIDLDKAQQKLDSSEDNLD 296

Query: 232 YLRSLTPEKVAE 267
             R    EK+ E
Sbjct: 297 IQRDTVREKIQE 308



>gi|2120487|pir||S61464   p83/100 protein - Lyme disease spirochete (strain Goe2)
          Length = 693

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +1

Query: 67  VGEDLGNLTPQVE-----DYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLD 231
           + E + NL  Q+E     ++  +++SQ+DA KK+  +L +K   L   Q   +   D LD
Sbjct: 258 ITETIENLRDQLEKATDEEHKKEIESQVDAKKKQKEELDKKAIDLDKAQQKLDSSEDNLD 317

Query: 232 YLRSLTPEKVAE 267
             R    EK+ E
Sbjct: 318 IQRDTVREKIQE 329



>gi|853736|emb|CAA54797.1|   P97 protein [Borrelia burgdorferi]
          Length = 693

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +1

Query: 67  VGEDLGNLTPQVE-----DYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLD 231
           + E + NL  Q+E     ++  +++SQ+DA KK+  +L +K   L   Q   +   D LD
Sbjct: 258 ITETIENLRDQLEKATDEEHKKEIESQVDAKKKQKEELDKKAIDLDKAQQKLDSSEDNLD 317

Query: 232 YLRSLTPEKVAE 267
             R    EK+ E
Sbjct: 318 IQRDTVREKIQE 329



>gi|2120492|pir||I40090   p93 protein - Lyme disease spirochete (fragment)
 gi|436322|emb|CAA49310.1|   p93 [Borrelia burgdorferi]
          Length = 693

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +1

Query: 67  VGEDLGNLTPQVE-----DYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLD 231
           + E + NL  Q+E     ++  +++SQ+DA KK+  +L +K   L   Q   +   D LD
Sbjct: 258 ITETIENLRDQLEKATDEEHRKEIESQVDAKKKQKEELDKKAIDLDKAQQKLDSSEDNLD 317

Query: 232 YLRSLTPEKVAE 267
             R    EK+ E
Sbjct: 318 IQRDTVREKIQE 329



>gi|346275|pir||A45033   myelin transcription factor 1 - human (fragment)
 gi|189042|gb|AAA59897.1|   myelin transcription factor 1
          Length = 725

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 22/97 (22%), Positives = 45/97 (46%)
 Frame = +1

Query: 76  DLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTPE 255
           DL     ++E  ++QLQSQ+ +M+K L ++  +N  ++      E+   L   L  L+  
Sbjct: 617 DLNESNSEMEAAMVQLQSQISSMEKNLKNIEEENKLIE------EQNEALFLELSGLSQA 670

Query: 256 KVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAP 366
            +  L+    P ++          ++TL+    ++AP
Sbjct: 671 LIQSLANIHLPHMEPICEQNFVPYVSTLTDMYSNQAP 707



>gi|1272517|emb|CAA57125.1|   p83/100 [Borrelia burgdorferi]
          Length = 679

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = +1

Query: 67  VGEDLGNLTPQVE-----DYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLD 231
           + E + NL  Q+E     ++  +++SQ+DA KK+  +L +K   L   Q   +   D LD
Sbjct: 237 ITETIENLRDQLEKATDEEHKKEIESQVDAKKKQKEELDKKAINLDKAQQKLDSAEDNLD 296

Query: 232 YLRSLTPEKVAE 267
             R+   EK+ E
Sbjct: 297 VQRNTVREKIQE 308



>gi|7463732|pir||S61460   p83/100 protein - Lyme disease spirochete (strain PBre)
          Length = 679

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = +1

Query: 67  VGEDLGNLTPQVE-----DYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLD 231
           + E + NL  Q+E     ++  +++SQ+DA KK+  +L +K   L   Q   +   D LD
Sbjct: 237 ITETIENLRDQLEKATDEEHKKEIESQVDAKKKQKEELDKKAINLDKAQQKLDSAEDNLD 296

Query: 232 YLRSLTPEKVAE 267
             R+   EK+ E
Sbjct: 297 VQRNTVREKIQE 308



>gi|15595089|ref|NP_212878.1|   antigen, p83/100 [Borrelia burgdorferi]
 gi|7463031|pir||G70192   antigen, p83/100 homolog - Lyme disease spirochete
 gi|2688679|gb|AAC67090.1|   antigen, p83/100 [Borrelia burgdorferi]
          Length = 700

 Score = 33.5 bits (75), Expect = 1.5
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = +1

Query: 67  VGEDLGNLTPQVE-----DYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLD 231
           + E + NL  Q+E     ++  +++SQ+DA KK+  +L +K   L   Q   +   D LD
Sbjct: 258 ITETIENLRDQLEKATDEEHKKEIESQVDAKKKQKEELDKKAINLDKAQQKLDSAEDNLD 317

Query: 232 YLRSLTPEKVAE 267
             R+   EK+ E
Sbjct: 318 VQRNTVREKIQE 329



>gi|5689437|dbj|BAA83002.1|   KIAA1050 protein [Homo sapiens]
          Length = 829

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 21/97 (21%), Positives = 44/97 (45%)
 Frame = +1

Query: 76  DLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTPE 255
           DL     ++E  ++QLQSQ+ +M+K L ++  +N  ++      E+   L   L  L+  
Sbjct: 721 DLNESNSEMEAAMVQLQSQISSMEKNLKNIEEENKLIE------EQNEALFLELSGLSQA 774

Query: 256 KVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAP 366
            +  L+    P ++          ++TL+    ++ P
Sbjct: 775 LIQSLANIRLPHMEPICEQNFDAYVSTLTDMYSNQDP 811



>gi|1076739|pir||S53306   MADS box protein MADS1 - rice
 gi|508577|gb|AAA66187.1|   box protein
 gi|11493807|gb|AAG35652.1|   MADS box protein MADS1 [Oryza sativa]
          Length = 257

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 28/91 (30%), Positives = 46/91 (50%)
 Frame = +1

Query: 1   DYLKKICCKTLKKMMKNYHVKLVGEDLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNS 180
           +YLK    KT  + ++     ++GEDLG L+ +    + QL++Q++   K++    RKN 
Sbjct: 91  EYLK---LKTRVEFLQTTQRNILGEDLGPLSMK---ELEQLENQIEVSLKQIRS--RKNQ 142

Query: 181 ALQMQQFVGEEKNDLLDYLRSLTPEKVAELS 273
           AL  Q F  + K   L  L     +K+ E S
Sbjct: 143 ALLDQLFDLKSKEQQLQDLNKDLRKKLQETS 173



>gi|16078573|ref|NP_389392.1|   similar to hypothetical proteins from B. subtilis [Bacillus
           subtilis]
 gi|8928491|sp|O34549|YLBO_BACSU   Hypothetical protein ylbO
 gi|7429448|pir||D69875   conserved hypothetical protein ylbO - Bacillus subtilis
 gi|2340012|emb|CAB11362.1|   YlbO protein [Bacillus subtilis]
 gi|2633880|emb|CAB13382.1|   similar to hypothetical proteins from B. subtilis [Bacillus
           subtilis]
          Length = 193

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
 Frame = +1

Query: 91  TPQVEDYIIQ---LQSQLDAMKKELHDLRRKNSALQMQQFVGEEKN----DLLDYLRSLT 249
           TP  +++ ++   L+ Q+ +++KEL DLR +N  L+ Q  + EE      D++D  R + 
Sbjct: 119 TPSAQEFQLEREKLKEQIQSLQKELEDLRSENQTLRNQLEMTEEDYKALIDIMDRARKMV 178

Query: 250 PEK 258
             K
Sbjct: 179 VSK 181



>gi|17975763|ref|NP_004526.1|   myelin transcription factor 1; proteolipid protein binding protein
            [Homo sapiens]
 gi|13638422|sp|Q01538|MYT1_HUMAN   Myelin transcription factor 1 (MYT1) (MYTI) (Proteolipid protein
            binding protein) (PLPB1)
 gi|4240159|dbj|BAA74858.1|   KIAA0835 protein [Homo sapiens]
 gi|11323191|emb|CAC17005.1|   dJ1022E24.3 (KIAA0835, similar to myelin transcription factor 1
            (MYT1)) [Homo sapiens]
          Length = 1121

 Score = 33.1 bits (74), Expect = 2.0
 Identities = 21/97 (21%), Positives = 44/97 (45%)
 Frame = +1

Query: 76   DLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLDYLRSLTPE 255
            DL     ++E  ++QLQSQ+ +M+K L ++  +N  ++      E+   L   L  L+  
Sbjct: 1013 DLNESNSEMEAAMVQLQSQISSMEKNLKNIEEENKLIE------EQNEALFLELSGLSQA 1066

Query: 256  KVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSKAP 366
             +  L+    P ++          ++TL+    ++ P
Sbjct: 1067 LIQSLANIRLPHMEPICEQNFDAYVSTLTDMYSNQDP 1103



>gi|9246936|gb|AAF86209.1|   VrrB [Bacillus anthracis]
          Length = 118

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 QGNHGEQILGAEKVGMHSPQALHSHHPHPQDLVHPQKHY 377
           QG+HG Q       G H  Q  H HH H Q  VH   H+
Sbjct: 30  QGHHGHQ-------GHHHHQGHHGHHGHHQQQVHHHGHH 61



>gi|9246917|gb|AAF86199.1|AF238885_2   VrrB [Bacillus anthracis]
          Length = 265

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 QGNHGEQILGAEKVGMHSPQALHSHHPHPQDLVHPQKHY 377
           QG+HG Q       G H  Q  H HH H Q  VH   H+
Sbjct: 144 QGHHGHQ-------GHHHHQGHHGHHGHHQQQVHHHGHH 175



>gi|23482118|gb|EAA18193.1|   hypothetical protein [Plasmodium yoelii yoelii]
          Length = 294

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +1

Query: 73  EDLGNLTPQVEDYIIQLQSQLDAMKKELHD 162
           +DL N+  + + Y+++LQ +L+ +KKEL D
Sbjct: 102 KDLNNVDKKTKKYVLKLQKELEGLKKELDD 131



>gi|2147891|pir||S61461   p83/100 protein - Borrelia garinii (strain PBr)
 gi|928999|emb|CAA58547.1|   p83/100 [Borrelia garinii]
          Length = 666

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
 Frame = +1

Query: 67  VGEDLGNLTPQVE-----DYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVGEEKNDLLD 231
           + E + NL  Q+E     ++  +++SQ+DA KK+  +L +K   +   Q   +   D LD
Sbjct: 237 ITETIENLRDQLEKATDEEHRKEIESQVDAKKKQKEELDKKAIDIDKAQQKLDSSEDNLD 296

Query: 232 YLRSLTPEKVAE 267
             R    EK+ E
Sbjct: 297 IQRDTVREKIQE 308



>gi|7512169|pir||T14156   kinesin-related protein - African clawed frog
 gi|2586071|gb|AAC60300.1|   kinesin-related protein [Xenopus laevis]
          Length = 2954

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 28/111 (25%), Positives = 54/111 (48%)
 Frame = +1

Query: 28   TLKKMMKNYHVKLVGEDLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQFVG 207
            +LK+ +    ++L  E L N          +L  ++D M+KE+  LR   +  Q ++   
Sbjct: 2201 SLKEQLDQIQMELRNEKLRNY---------ELCEKMDIMEKEISVLRLMQNEPQQEEDDV 2251

Query: 208  EEKNDLLDYLRSLTPEKVAELSESTSPGVQEAIHSVVHGLLATLSPKIHSK 360
             E+ D+L+       +++ EL E  S     A++S  H LL++LS ++  +
Sbjct: 2252 AERMDILESRN----QEIQELMEKIS-----AVYSEQHTLLSSLSSELQKE 2293



>gi|9246944|gb|AAF86213.1|   VrrB [Bacillus anthracis]
          Length = 130

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 QGNHGEQILGAEKVGMHSPQALHSHHPHPQDLVHPQKHY 377
           QG+HG Q       G H  Q  H HH H Q  VH   H+
Sbjct: 42  QGHHGHQ-------GHHHHQGHHGHHGHHQQQVHHHGHH 73



>gi|9246946|gb|AAF86214.1|   VrrB [Bacillus anthracis]
          Length = 133

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 QGNHGEQILGAEKVGMHSPQALHSHHPHPQDLVHPQKHY 377
           QG+HG Q       G H  Q  H HH H Q  VH   H+
Sbjct: 42  QGHHGHQ-------GHHHHQGHHGHHGHHQQQVHHHGHH 73



>gi|20349232|ref|XP_111984.1|   similar to RIKEN cDNA C330016H24 [Mus musculus]
          Length = 384

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 12/36 (33%), Positives = 27/36 (75%)
 Frame = +1

Query: 91  TPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQ 198
           T + E+++++L+ +++ ++ +L +LRR+N ALQ  Q
Sbjct: 288 TVKAENHVLRLKQEINLLQAQLSNLRRENEALQSDQ 323



>gi|9246930|gb|AAF86206.1|   VrrB [Bacillus anthracis]
          Length = 112

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 QGNHGEQILGAEKVGMHSPQALHSHHPHPQDLVHPQKHY 377
           QG+HG Q       G H  Q  H HH H Q  VH   H+
Sbjct: 30  QGHHGHQ-------GHHHHQGHHGHHGHHQQQVHHHGHH 61



>gi|9246926|gb|AAF86204.1|   VrrB [Bacillus anthracis]
          Length = 109

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -1

Query: 493 QGNHGEQILGAEKVGMHSPQALHSHHPHPQDLVHPQKHY 377
           QG+HG Q       G H  Q  H HH H Q  VH   H+
Sbjct: 21  QGHHGHQ-------GHHHHQGHHGHHGHHQQQVHHHGHH 52



>gi|15054439|gb|AAK77948.1|   M protein [Streptococcus pyogenes]
          Length = 240

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
 Frame = +1

Query: 43  MKNYHVKLVG--EDLGNLTPQVEDYIIQLQSQLDAMKKELHDLRRKNSALQMQQF-VGEE 213
           +KN + KL    +DL +   +++    QL ++  A+K+E    ++ N ALQ Q   +  E
Sbjct: 50  LKNTNGKLQSRNDDLTSENAELKQRSDQLSTEKQALKEEAEKTKQNNEALQTQNANLTSE 109

Query: 214 KNDLLDYLRSLTPEK 258
           K+ L +  ++LT EK
Sbjct: 110 KDRLTEANKTLTSEK 124






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Dec 9, 2002  8:40 PM
  Number of letters in database: 397,579,747
  Number of sequences in database:  1,247,039
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 417,481,405
Number of Sequences: 1247039
Number of extensions: 8901098
Number of successful extensions: 30321
Number of sequences better than 10.0: 248
Number of HSP's better than 10.0 without gapping: 28432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30188
length of database: 397,579,747
effective HSP length: 115
effective length of database: 254,170,262
effective search space used: 16775237292
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)